Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps33aQ9D2N9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps33aQ9D2N9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps33aQ9D2N9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Vps33aQ9D2N9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Vps33aQ9D2N9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.22■□□□□ 0.67
Vps33aQ9D2N9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps33aQ9D2N9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps33aQ9D2N9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps33aQ9D2N9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Vps33aQ9D2N9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps33aQ9D2N9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps33aQ9D2N9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps33aQ9D2N9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps33aQ9D2N9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps33aQ9D2N9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps33aQ9D2N9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.22■□□□□ 0.67
Vps33aQ9D2N9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps33aQ9D2N9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Vps33aQ9D2N9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps33aQ9D2N9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.21■□□□□ 0.67
Vps33aQ9D2N9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps33aQ9D2N9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
Vps33aQ9D2N9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.21■□□□□ 0.67
Vps33aQ9D2N9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Vps33aQ9D2N9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vps33aQ9D2N9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Vps33aQ9D2N9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps33aQ9D2N9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.21■□□□□ 0.67
Vps33aQ9D2N9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Vps33aQ9D2N9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps33aQ9D2N9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps33aQ9D2N9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps33aQ9D2N9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps33aQ9D2N9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.2■□□□□ 0.66
Vps33aQ9D2N9 Gm7417-201ENSMUST00000192950 473 ntBASIC19.2■□□□□ 0.66
Vps33aQ9D2N9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.2■□□□□ 0.66
Vps33aQ9D2N9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps33aQ9D2N9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps33aQ9D2N9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps33aQ9D2N9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Vps33aQ9D2N9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps33aQ9D2N9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps33aQ9D2N9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Vps33aQ9D2N9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps33aQ9D2N9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps33aQ9D2N9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.19■□□□□ 0.66
Vps33aQ9D2N9 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.19■□□□□ 0.66
Vps33aQ9D2N9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.19■□□□□ 0.66
Vps33aQ9D2N9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Vps33aQ9D2N9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.19■□□□□ 0.66
Vps33aQ9D2N9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps33aQ9D2N9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps33aQ9D2N9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Vps33aQ9D2N9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps33aQ9D2N9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps33aQ9D2N9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps33aQ9D2N9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps33aQ9D2N9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Vps33aQ9D2N9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vps33aQ9D2N9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps33aQ9D2N9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps33aQ9D2N9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps33aQ9D2N9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps33aQ9D2N9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vps33aQ9D2N9 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.18■□□□□ 0.66
Vps33aQ9D2N9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps33aQ9D2N9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps33aQ9D2N9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Vps33aQ9D2N9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.18■□□□□ 0.66
Vps33aQ9D2N9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps33aQ9D2N9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps33aQ9D2N9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.18■□□□□ 0.66
Vps33aQ9D2N9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps33aQ9D2N9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vps33aQ9D2N9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps33aQ9D2N9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps33aQ9D2N9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Vps33aQ9D2N9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps33aQ9D2N9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps33aQ9D2N9 Gm15546-201ENSMUST00000122095 826 ntBASIC19.17■□□□□ 0.66
Vps33aQ9D2N9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps33aQ9D2N9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps33aQ9D2N9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps33aQ9D2N9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps33aQ9D2N9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Vps33aQ9D2N9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vps33aQ9D2N9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps33aQ9D2N9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps33aQ9D2N9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vps33aQ9D2N9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps33aQ9D2N9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps33aQ9D2N9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps33aQ9D2N9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps33aQ9D2N9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vps33aQ9D2N9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps33aQ9D2N9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vps33aQ9D2N9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vps33aQ9D2N9 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.16■□□□□ 0.66
Vps33aQ9D2N9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms