Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk1aQ9D132 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk1aQ9D132 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Upk1aQ9D132 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Upk1aQ9D132 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
Upk1aQ9D132 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk1aQ9D132 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk1aQ9D132 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk1aQ9D132 Gm26833-201ENSMUST00000180899 440 ntBASIC17.21■□□□□ 0.35
Upk1aQ9D132 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk1aQ9D132 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk1aQ9D132 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk1aQ9D132 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.21■□□□□ 0.35
Upk1aQ9D132 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Upk1aQ9D132 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk1aQ9D132 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Upk1aQ9D132 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Upk1aQ9D132 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.21■□□□□ 0.34
Upk1aQ9D132 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.2■□□□□ 0.34
Upk1aQ9D132 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Upk1aQ9D132 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
Upk1aQ9D132 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Upk1aQ9D132 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Upk1aQ9D132 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk1aQ9D132 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk1aQ9D132 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk1aQ9D132 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk1aQ9D132 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk1aQ9D132 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk1aQ9D132 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Upk1aQ9D132 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk1aQ9D132 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk1aQ9D132 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk1aQ9D132 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Upk1aQ9D132 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk1aQ9D132 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk1aQ9D132 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk1aQ9D132 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk1aQ9D132 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.19■□□□□ 0.34
Upk1aQ9D132 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk1aQ9D132 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Upk1aQ9D132 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk1aQ9D132 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk1aQ9D132 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Upk1aQ9D132 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Upk1aQ9D132 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Upk1aQ9D132 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Upk1aQ9D132 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Upk1aQ9D132 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Upk1aQ9D132 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Upk1aQ9D132 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Upk1aQ9D132 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Upk1aQ9D132 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Upk1aQ9D132 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Upk1aQ9D132 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.18■□□□□ 0.34
Upk1aQ9D132 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.18■□□□□ 0.34
Upk1aQ9D132 Gm43017-201ENSMUST00000198296 752 ntBASIC17.18■□□□□ 0.34
Upk1aQ9D132 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.18■□□□□ 0.34
Upk1aQ9D132 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Upk1aQ9D132 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Upk1aQ9D132 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.18■□□□□ 0.34
Upk1aQ9D132 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Upk1aQ9D132 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Upk1aQ9D132 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Upk1aQ9D132 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Upk1aQ9D132 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Upk1aQ9D132 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Upk1aQ9D132 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Upk1aQ9D132 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Upk1aQ9D132 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Upk1aQ9D132 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Upk1aQ9D132 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Upk1aQ9D132 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Upk1aQ9D132 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Upk1aQ9D132 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Upk1aQ9D132 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Upk1aQ9D132 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Upk1aQ9D132 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Upk1aQ9D132 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Upk1aQ9D132 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.17■□□□□ 0.34
Upk1aQ9D132 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.16■□□□□ 0.34
Upk1aQ9D132 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk1aQ9D132 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk1aQ9D132 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk1aQ9D132 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Upk1aQ9D132 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk1aQ9D132 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk1aQ9D132 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk1aQ9D132 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk1aQ9D132 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk1aQ9D132 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.16■□□□□ 0.34
Upk1aQ9D132 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk1aQ9D132 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk1aQ9D132 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Upk1aQ9D132 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.16■□□□□ 0.34
Upk1aQ9D132 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.16■□□□□ 0.34
Upk1aQ9D132 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk1aQ9D132 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk1aQ9D132 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Upk1aQ9D132 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms