Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.67■□□□□ 0.58
Snf8Q9CZ28 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.67■□□□□ 0.58
Snf8Q9CZ28 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snf8Q9CZ28 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
Snf8Q9CZ28 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Snf8Q9CZ28 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Snf8Q9CZ28 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snf8Q9CZ28 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snf8Q9CZ28 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Snf8Q9CZ28 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Snf8Q9CZ28 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.67■□□□□ 0.58
Snf8Q9CZ28 Gm43017-201ENSMUST00000198296 752 ntBASIC18.67■□□□□ 0.58
Snf8Q9CZ28 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snf8Q9CZ28 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Snf8Q9CZ28 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Snf8Q9CZ28 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Snf8Q9CZ28 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Snf8Q9CZ28 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Snf8Q9CZ28 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snf8Q9CZ28 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snf8Q9CZ28 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snf8Q9CZ28 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.66■□□□□ 0.58
Snf8Q9CZ28 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snf8Q9CZ28 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.66■□□□□ 0.58
Snf8Q9CZ28 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Snf8Q9CZ28 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.66■□□□□ 0.58
Snf8Q9CZ28 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.66■□□□□ 0.58
Snf8Q9CZ28 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snf8Q9CZ28 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snf8Q9CZ28 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Snf8Q9CZ28 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.66■□□□□ 0.58
Snf8Q9CZ28 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Snf8Q9CZ28 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snf8Q9CZ28 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snf8Q9CZ28 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Snf8Q9CZ28 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Snf8Q9CZ28 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Snf8Q9CZ28 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snf8Q9CZ28 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.65■□□□□ 0.58
Snf8Q9CZ28 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.65■□□□□ 0.58
Snf8Q9CZ28 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.65■□□□□ 0.58
Snf8Q9CZ28 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Snf8Q9CZ28 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snf8Q9CZ28 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Snf8Q9CZ28 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Snf8Q9CZ28 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.64■□□□□ 0.58
Snf8Q9CZ28 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Snf8Q9CZ28 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snf8Q9CZ28 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snf8Q9CZ28 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snf8Q9CZ28 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snf8Q9CZ28 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Snf8Q9CZ28 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Snf8Q9CZ28 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snf8Q9CZ28 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snf8Q9CZ28 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snf8Q9CZ28 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snf8Q9CZ28 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snf8Q9CZ28 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Snf8Q9CZ28 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snf8Q9CZ28 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snf8Q9CZ28 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snf8Q9CZ28 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Snf8Q9CZ28 Gm43060-201ENSMUST00000200621 289 ntBASIC18.63■□□□□ 0.57
Snf8Q9CZ28 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Snf8Q9CZ28 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snf8Q9CZ28 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snf8Q9CZ28 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Snf8Q9CZ28 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Snf8Q9CZ28 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snf8Q9CZ28 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snf8Q9CZ28 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snf8Q9CZ28 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snf8Q9CZ28 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Snf8Q9CZ28 Gm8969-201ENSMUST00000199694 526 ntBASIC18.62■□□□□ 0.57
Snf8Q9CZ28 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.62■□□□□ 0.57
Snf8Q9CZ28 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snf8Q9CZ28 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snf8Q9CZ28 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snf8Q9CZ28 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snf8Q9CZ28 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Snf8Q9CZ28 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snf8Q9CZ28 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snf8Q9CZ28 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snf8Q9CZ28 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Snf8Q9CZ28 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snf8Q9CZ28 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snf8Q9CZ28 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snf8Q9CZ28 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Snf8Q9CZ28 Gm13146-201ENSMUST00000118508 780 ntBASIC18.61■□□□□ 0.57
Snf8Q9CZ28 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snf8Q9CZ28 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.61■□□□□ 0.57
Snf8Q9CZ28 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snf8Q9CZ28 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Snf8Q9CZ28 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Snf8Q9CZ28 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.61■□□□□ 0.57
Snf8Q9CZ28 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snf8Q9CZ28 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Snf8Q9CZ28 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Snf8Q9CZ28 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms