Protein–RNA interactions for Protein: Q9CYC3

Tmem39a, Transmembrane protein 39A, mousemouse

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem39aQ9CYC3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tmem39aQ9CYC3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Tmem39aQ9CYC3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tmem39aQ9CYC3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tmem39aQ9CYC3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tmem39aQ9CYC3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tmem39aQ9CYC3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.37■□□□□ 0.85
Tmem39aQ9CYC3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tmem39aQ9CYC3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tmem39aQ9CYC3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tmem39aQ9CYC3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tmem39aQ9CYC3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.37■□□□□ 0.85
Tmem39aQ9CYC3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tmem39aQ9CYC3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.37■□□□□ 0.85
Tmem39aQ9CYC3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tmem39aQ9CYC3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tmem39aQ9CYC3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tmem39aQ9CYC3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tmem39aQ9CYC3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tmem39aQ9CYC3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tmem39aQ9CYC3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tmem39aQ9CYC3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tmem39aQ9CYC3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tmem39aQ9CYC3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Tmem39aQ9CYC3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tmem39aQ9CYC3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Tmem39aQ9CYC3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tmem39aQ9CYC3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.36■□□□□ 0.85
Tmem39aQ9CYC3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Tmem39aQ9CYC3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tmem39aQ9CYC3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tmem39aQ9CYC3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tmem39aQ9CYC3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tmem39aQ9CYC3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tmem39aQ9CYC3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tmem39aQ9CYC3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.35■□□□□ 0.85
Tmem39aQ9CYC3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tmem39aQ9CYC3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tmem39aQ9CYC3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tmem39aQ9CYC3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tmem39aQ9CYC3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tmem39aQ9CYC3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem39aQ9CYC3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem39aQ9CYC3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem39aQ9CYC3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem39aQ9CYC3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
Tmem39aQ9CYC3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.34■□□□□ 0.85
Tmem39aQ9CYC3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem39aQ9CYC3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem39aQ9CYC3 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.34■□□□□ 0.85
Tmem39aQ9CYC3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem39aQ9CYC3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem39aQ9CYC3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem39aQ9CYC3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tmem39aQ9CYC3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tmem39aQ9CYC3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tmem39aQ9CYC3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tmem39aQ9CYC3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tmem39aQ9CYC3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.33■□□□□ 0.84
Tmem39aQ9CYC3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Tmem39aQ9CYC3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tmem39aQ9CYC3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tmem39aQ9CYC3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Tmem39aQ9CYC3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.33■□□□□ 0.84
Tmem39aQ9CYC3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tmem39aQ9CYC3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tmem39aQ9CYC3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Tmem39aQ9CYC3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmem39aQ9CYC3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tmem39aQ9CYC3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmem39aQ9CYC3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmem39aQ9CYC3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmem39aQ9CYC3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Tmem39aQ9CYC3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmem39aQ9CYC3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmem39aQ9CYC3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmem39aQ9CYC3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.32■□□□□ 0.84
Tmem39aQ9CYC3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tmem39aQ9CYC3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tmem39aQ9CYC3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Tmem39aQ9CYC3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmem39aQ9CYC3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmem39aQ9CYC3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tmem39aQ9CYC3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tmem39aQ9CYC3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.31■□□□□ 0.84
Tmem39aQ9CYC3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tmem39aQ9CYC3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tmem39aQ9CYC3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tmem39aQ9CYC3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.31■□□□□ 0.84
Tmem39aQ9CYC3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tmem39aQ9CYC3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tmem39aQ9CYC3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.31■□□□□ 0.84
Tmem39aQ9CYC3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tmem39aQ9CYC3 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.31■□□□□ 0.84
Tmem39aQ9CYC3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.31■□□□□ 0.84
Tmem39aQ9CYC3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tmem39aQ9CYC3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tmem39aQ9CYC3 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.3■□□□□ 0.84
Tmem39aQ9CYC3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tmem39aQ9CYC3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms