Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd1lQ9CXF7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Chd1lQ9CXF7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd1lQ9CXF7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd1lQ9CXF7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1lQ9CXF7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1lQ9CXF7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1lQ9CXF7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1lQ9CXF7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1lQ9CXF7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1lQ9CXF7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1lQ9CXF7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1lQ9CXF7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.47■□□□□ 0.87
Chd1lQ9CXF7 Gm8969-201ENSMUST00000199694 526 ntBASIC20.47■□□□□ 0.87
Chd1lQ9CXF7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1lQ9CXF7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Chd1lQ9CXF7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1lQ9CXF7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1lQ9CXF7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1lQ9CXF7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1lQ9CXF7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1lQ9CXF7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Chd1lQ9CXF7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd1lQ9CXF7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd1lQ9CXF7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd1lQ9CXF7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Chd1lQ9CXF7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.46■□□□□ 0.87
Chd1lQ9CXF7 Gm45102-201ENSMUST00000207427 857 ntBASIC20.46■□□□□ 0.87
Chd1lQ9CXF7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd1lQ9CXF7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd1lQ9CXF7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd1lQ9CXF7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd1lQ9CXF7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd1lQ9CXF7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.46■□□□□ 0.87
Chd1lQ9CXF7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Chd1lQ9CXF7 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd1lQ9CXF7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd1lQ9CXF7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Chd1lQ9CXF7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Chd1lQ9CXF7 Gm27801-201ENSMUST00000184174 223 ntBASIC20.45■□□□□ 0.86
Chd1lQ9CXF7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.45■□□□□ 0.86
Chd1lQ9CXF7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.45■□□□□ 0.86
Chd1lQ9CXF7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Chd1lQ9CXF7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Chd1lQ9CXF7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.45■□□□□ 0.86
Chd1lQ9CXF7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd1lQ9CXF7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Chd1lQ9CXF7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd1lQ9CXF7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Chd1lQ9CXF7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd1lQ9CXF7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd1lQ9CXF7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chd1lQ9CXF7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.44■□□□□ 0.86
Chd1lQ9CXF7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Chd1lQ9CXF7 Gm11421-201ENSMUST00000122124 294 ntBASIC20.44■□□□□ 0.86
Chd1lQ9CXF7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chd1lQ9CXF7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd1lQ9CXF7 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.44■□□□□ 0.86
Chd1lQ9CXF7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd1lQ9CXF7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd1lQ9CXF7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd1lQ9CXF7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1lQ9CXF7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1lQ9CXF7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
Chd1lQ9CXF7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1lQ9CXF7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1lQ9CXF7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1lQ9CXF7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.43■□□□□ 0.86
Chd1lQ9CXF7 Smad6-203ENSMUST00000179458 273 ntBASIC20.43■□□□□ 0.86
Chd1lQ9CXF7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.43■□□□□ 0.86
Chd1lQ9CXF7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1lQ9CXF7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1lQ9CXF7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1lQ9CXF7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1lQ9CXF7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Chd1lQ9CXF7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Chd1lQ9CXF7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.43■□□□□ 0.86
Chd1lQ9CXF7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1lQ9CXF7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1lQ9CXF7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd1lQ9CXF7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd1lQ9CXF7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd1lQ9CXF7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd1lQ9CXF7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chd1lQ9CXF7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.42■□□□□ 0.86
Chd1lQ9CXF7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Chd1lQ9CXF7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd1lQ9CXF7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd1lQ9CXF7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chd1lQ9CXF7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd1lQ9CXF7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Chd1lQ9CXF7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chd1lQ9CXF7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Chd1lQ9CXF7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
Chd1lQ9CXF7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Chd1lQ9CXF7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd1lQ9CXF7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd1lQ9CXF7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Chd1lQ9CXF7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd1lQ9CXF7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms