Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Khdc3Q9CWU5 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Khdc3Q9CWU5 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Khdc3Q9CWU5 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Khdc3Q9CWU5 Gm6365-201ENSMUST00000054711 744 ntBASIC17.38■□□□□ 0.37
Khdc3Q9CWU5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.38■□□□□ 0.37
Khdc3Q9CWU5 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Khdc3Q9CWU5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Khdc3Q9CWU5 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
Khdc3Q9CWU5 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Khdc3Q9CWU5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Khdc3Q9CWU5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Khdc3Q9CWU5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Khdc3Q9CWU5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Khdc3Q9CWU5 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Khdc3Q9CWU5 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Khdc3Q9CWU5 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Khdc3Q9CWU5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Khdc3Q9CWU5 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.37■□□□□ 0.37
Khdc3Q9CWU5 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Khdc3Q9CWU5 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.37■□□□□ 0.37
Khdc3Q9CWU5 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Khdc3Q9CWU5 Gm27405-201ENSMUST00000184201 112 ntBASIC17.37■□□□□ 0.37
Khdc3Q9CWU5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Khdc3Q9CWU5 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Khdc3Q9CWU5 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.37■□□□□ 0.37
Khdc3Q9CWU5 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Khdc3Q9CWU5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Khdc3Q9CWU5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Khdc3Q9CWU5 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Khdc3Q9CWU5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Khdc3Q9CWU5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Khdc3Q9CWU5 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Khdc3Q9CWU5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Khdc3Q9CWU5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Khdc3Q9CWU5 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Khdc3Q9CWU5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Khdc3Q9CWU5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.36■□□□□ 0.37
Khdc3Q9CWU5 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.36■□□□□ 0.37
Khdc3Q9CWU5 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Khdc3Q9CWU5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Khdc3Q9CWU5 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Khdc3Q9CWU5 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Khdc3Q9CWU5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Khdc3Q9CWU5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Khdc3Q9CWU5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Khdc3Q9CWU5 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Khdc3Q9CWU5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Khdc3Q9CWU5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Khdc3Q9CWU5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Khdc3Q9CWU5 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.35■□□□□ 0.37
Khdc3Q9CWU5 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Khdc3Q9CWU5 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.35■□□□□ 0.37
Khdc3Q9CWU5 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Khdc3Q9CWU5 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.35■□□□□ 0.37
Khdc3Q9CWU5 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Khdc3Q9CWU5 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.35■□□□□ 0.37
Khdc3Q9CWU5 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Khdc3Q9CWU5 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Khdc3Q9CWU5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Khdc3Q9CWU5 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Khdc3Q9CWU5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Khdc3Q9CWU5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Khdc3Q9CWU5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.34■□□□□ 0.37
Khdc3Q9CWU5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Khdc3Q9CWU5 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Khdc3Q9CWU5 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.34■□□□□ 0.37
Khdc3Q9CWU5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Khdc3Q9CWU5 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Khdc3Q9CWU5 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Khdc3Q9CWU5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Khdc3Q9CWU5 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Khdc3Q9CWU5 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Khdc3Q9CWU5 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Khdc3Q9CWU5 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Khdc3Q9CWU5 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Khdc3Q9CWU5 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Khdc3Q9CWU5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Khdc3Q9CWU5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Khdc3Q9CWU5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Khdc3Q9CWU5 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Khdc3Q9CWU5 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Khdc3Q9CWU5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Khdc3Q9CWU5 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Khdc3Q9CWU5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Khdc3Q9CWU5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Khdc3Q9CWU5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Khdc3Q9CWU5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Khdc3Q9CWU5 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Khdc3Q9CWU5 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Khdc3Q9CWU5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.33■□□□□ 0.36
Khdc3Q9CWU5 Gm7291-201ENSMUST00000199147 382 ntBASIC17.33■□□□□ 0.36
Khdc3Q9CWU5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.33■□□□□ 0.36
Khdc3Q9CWU5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Khdc3Q9CWU5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Khdc3Q9CWU5 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Khdc3Q9CWU5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Khdc3Q9CWU5 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Khdc3Q9CWU5 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Khdc3Q9CWU5 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms