Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldnd1Q9CQX5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cldnd1Q9CQX5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cldnd1Q9CQX5 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldnd1Q9CQX5 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cldnd1Q9CQX5 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cldnd1Q9CQX5 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldnd1Q9CQX5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldnd1Q9CQX5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldnd1Q9CQX5 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldnd1Q9CQX5 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldnd1Q9CQX5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cldnd1Q9CQX5 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.61■□□□□ 0.57
Cldnd1Q9CQX5 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.61■□□□□ 0.57
Cldnd1Q9CQX5 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cldnd1Q9CQX5 Gm17661-201ENSMUST00000170317 270 ntBASIC18.61■□□□□ 0.57
Cldnd1Q9CQX5 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.61■□□□□ 0.57
Cldnd1Q9CQX5 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldnd1Q9CQX5 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldnd1Q9CQX5 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldnd1Q9CQX5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Cldnd1Q9CQX5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldnd1Q9CQX5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldnd1Q9CQX5 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldnd1Q9CQX5 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cldnd1Q9CQX5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cldnd1Q9CQX5 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.6■□□□□ 0.57
Cldnd1Q9CQX5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cldnd1Q9CQX5 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldnd1Q9CQX5 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.59■□□□□ 0.57
Cldnd1Q9CQX5 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldnd1Q9CQX5 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldnd1Q9CQX5 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldnd1Q9CQX5 Mir2861-201ENSMUST00000175539 82 ntBASIC18.59■□□□□ 0.57
Cldnd1Q9CQX5 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.59■□□□□ 0.57
Cldnd1Q9CQX5 Gm17971-201ENSMUST00000190239 806 ntBASIC18.59■□□□□ 0.57
Cldnd1Q9CQX5 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.59■□□□□ 0.57
Cldnd1Q9CQX5 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.59■□□□□ 0.57
Cldnd1Q9CQX5 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.59■□□□□ 0.57
Cldnd1Q9CQX5 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldnd1Q9CQX5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldnd1Q9CQX5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cldnd1Q9CQX5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cldnd1Q9CQX5 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cldnd1Q9CQX5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cldnd1Q9CQX5 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cldnd1Q9CQX5 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cldnd1Q9CQX5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cldnd1Q9CQX5 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cldnd1Q9CQX5 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.58■□□□□ 0.56
Cldnd1Q9CQX5 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.58■□□□□ 0.56
Cldnd1Q9CQX5 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cldnd1Q9CQX5 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.58■□□□□ 0.56
Cldnd1Q9CQX5 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
Cldnd1Q9CQX5 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldnd1Q9CQX5 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldnd1Q9CQX5 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldnd1Q9CQX5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Cldnd1Q9CQX5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldnd1Q9CQX5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Cldnd1Q9CQX5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldnd1Q9CQX5 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldnd1Q9CQX5 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cldnd1Q9CQX5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldnd1Q9CQX5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldnd1Q9CQX5 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldnd1Q9CQX5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cldnd1Q9CQX5 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cldnd1Q9CQX5 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.57■□□□□ 0.56
Cldnd1Q9CQX5 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.57■□□□□ 0.56
Cldnd1Q9CQX5 Gm7461-201ENSMUST00000058918 827 ntBASIC18.57■□□□□ 0.56
Cldnd1Q9CQX5 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldnd1Q9CQX5 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldnd1Q9CQX5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldnd1Q9CQX5 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.57■□□□□ 0.56
Cldnd1Q9CQX5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.56■□□□□ 0.56
Cldnd1Q9CQX5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldnd1Q9CQX5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldnd1Q9CQX5 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldnd1Q9CQX5 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.56■□□□□ 0.56
Cldnd1Q9CQX5 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.56■□□□□ 0.56
Cldnd1Q9CQX5 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldnd1Q9CQX5 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cldnd1Q9CQX5 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cldnd1Q9CQX5 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.56■□□□□ 0.56
Cldnd1Q9CQX5 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldnd1Q9CQX5 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Cldnd1Q9CQX5 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.56■□□□□ 0.56
Cldnd1Q9CQX5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cldnd1Q9CQX5 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldnd1Q9CQX5 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldnd1Q9CQX5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldnd1Q9CQX5 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cldnd1Q9CQX5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cldnd1Q9CQX5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.55■□□□□ 0.56
Cldnd1Q9CQX5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldnd1Q9CQX5 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldnd1Q9CQX5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cldnd1Q9CQX5 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldnd1Q9CQX5 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms