Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trim33Q99PP7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trim33Q99PP7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trim33Q99PP7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trim33Q99PP7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim33Q99PP7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim33Q99PP7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim33Q99PP7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trim33Q99PP7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trim33Q99PP7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim33Q99PP7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim33Q99PP7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Trim33Q99PP7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trim33Q99PP7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim33Q99PP7 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.95■□□□□ 0.46
Trim33Q99PP7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim33Q99PP7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim33Q99PP7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim33Q99PP7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim33Q99PP7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim33Q99PP7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trim33Q99PP7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim33Q99PP7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim33Q99PP7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.94■□□□□ 0.46
Trim33Q99PP7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim33Q99PP7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim33Q99PP7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim33Q99PP7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim33Q99PP7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.94■□□□□ 0.46
Trim33Q99PP7 Gm10602-201ENSMUST00000098239 609 ntBASIC17.94■□□□□ 0.46
Trim33Q99PP7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim33Q99PP7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim33Q99PP7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trim33Q99PP7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim33Q99PP7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim33Q99PP7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim33Q99PP7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim33Q99PP7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim33Q99PP7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.93■□□□□ 0.46
Trim33Q99PP7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim33Q99PP7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim33Q99PP7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim33Q99PP7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Trim33Q99PP7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim33Q99PP7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim33Q99PP7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim33Q99PP7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.93■□□□□ 0.46
Trim33Q99PP7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trim33Q99PP7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim33Q99PP7 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.93■□□□□ 0.46
Trim33Q99PP7 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.93■□□□□ 0.46
Trim33Q99PP7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim33Q99PP7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim33Q99PP7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim33Q99PP7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim33Q99PP7 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.92■□□□□ 0.46
Trim33Q99PP7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim33Q99PP7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim33Q99PP7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim33Q99PP7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trim33Q99PP7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim33Q99PP7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim33Q99PP7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim33Q99PP7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim33Q99PP7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim33Q99PP7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.91■□□□□ 0.46
Trim33Q99PP7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim33Q99PP7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Trim33Q99PP7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim33Q99PP7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim33Q99PP7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trim33Q99PP7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trim33Q99PP7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim33Q99PP7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim33Q99PP7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim33Q99PP7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Trim33Q99PP7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim33Q99PP7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Trim33Q99PP7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim33Q99PP7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim33Q99PP7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim33Q99PP7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim33Q99PP7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim33Q99PP7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim33Q99PP7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim33Q99PP7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim33Q99PP7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Trim33Q99PP7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim33Q99PP7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.9■□□□□ 0.46
Trim33Q99PP7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim33Q99PP7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trim33Q99PP7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim33Q99PP7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim33Q99PP7 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.9■□□□□ 0.46
Trim33Q99PP7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim33Q99PP7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim33Q99PP7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim33Q99PP7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim33Q99PP7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim33Q99PP7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms