Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim34aQ99PP6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Trim34aQ99PP6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC22.41■■□□□ 1.18
Trim34aQ99PP6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim34aQ99PP6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Trim34aQ99PP6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC22.41■■□□□ 1.18
Trim34aQ99PP6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim34aQ99PP6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Trim34aQ99PP6 Gm10654-201ENSMUST00000098653 1633 ntBASIC22.41■■□□□ 1.18
Trim34aQ99PP6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim34aQ99PP6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC22.41■■□□□ 1.18
Trim34aQ99PP6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim34aQ99PP6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC22.4■■□□□ 1.18
Trim34aQ99PP6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim34aQ99PP6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim34aQ99PP6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim34aQ99PP6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
Trim34aQ99PP6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trim34aQ99PP6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Trim34aQ99PP6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trim34aQ99PP6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trim34aQ99PP6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Trim34aQ99PP6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trim34aQ99PP6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
Trim34aQ99PP6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
Trim34aQ99PP6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC22.39■■□□□ 1.17
Trim34aQ99PP6 Gm15853-202ENSMUST00000195518 2041 ntBASIC22.39■■□□□ 1.17
Trim34aQ99PP6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trim34aQ99PP6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trim34aQ99PP6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim34aQ99PP6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim34aQ99PP6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim34aQ99PP6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC22.38■■□□□ 1.17
Trim34aQ99PP6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim34aQ99PP6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim34aQ99PP6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC22.38■■□□□ 1.17
Trim34aQ99PP6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC22.38■■□□□ 1.17
Trim34aQ99PP6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim34aQ99PP6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Trim34aQ99PP6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Trim34aQ99PP6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC22.38■■□□□ 1.17
Trim34aQ99PP6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC22.38■■□□□ 1.17
Trim34aQ99PP6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Trim34aQ99PP6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim34aQ99PP6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Trim34aQ99PP6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Trim34aQ99PP6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim34aQ99PP6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim34aQ99PP6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim34aQ99PP6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim34aQ99PP6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim34aQ99PP6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trim34aQ99PP6 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Trim34aQ99PP6 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Trim34aQ99PP6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim34aQ99PP6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC22.36■■□□□ 1.17
Trim34aQ99PP6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Trim34aQ99PP6 Mir2861-201ENSMUST00000175539 82 ntBASIC22.36■■□□□ 1.17
Trim34aQ99PP6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim34aQ99PP6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Trim34aQ99PP6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
Trim34aQ99PP6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim34aQ99PP6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Trim34aQ99PP6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Trim34aQ99PP6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC22.36■■□□□ 1.17
Trim34aQ99PP6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim34aQ99PP6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim34aQ99PP6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim34aQ99PP6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim34aQ99PP6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC22.35■■□□□ 1.17
Trim34aQ99PP6 Gm7889-201ENSMUST00000185591 958 ntBASIC22.35■■□□□ 1.17
Trim34aQ99PP6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trim34aQ99PP6 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trim34aQ99PP6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim34aQ99PP6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC22.35■■□□□ 1.17
Trim34aQ99PP6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim34aQ99PP6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC22.35■■□□□ 1.17
Trim34aQ99PP6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim34aQ99PP6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trim34aQ99PP6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim34aQ99PP6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim34aQ99PP6 Hsf1-204ENSMUST00000226872 2104 ntBASIC22.34■■□□□ 1.17
Trim34aQ99PP6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim34aQ99PP6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim34aQ99PP6 Rncr4-201ENSMUST00000194541 2234 ntBASIC22.34■■□□□ 1.17
Trim34aQ99PP6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC22.34■■□□□ 1.17
Trim34aQ99PP6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim34aQ99PP6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim34aQ99PP6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Trim34aQ99PP6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim34aQ99PP6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Trim34aQ99PP6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim34aQ99PP6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim34aQ99PP6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim34aQ99PP6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC22.33■■□□□ 1.17
Trim34aQ99PP6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim34aQ99PP6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim34aQ99PP6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim34aQ99PP6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim34aQ99PP6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC22.33■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms