Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh23Q99PF4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh23Q99PF4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh23Q99PF4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.6■□□□□ 0.57
Cdh23Q99PF4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.6■□□□□ 0.57
Cdh23Q99PF4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh23Q99PF4 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh23Q99PF4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh23Q99PF4 Mir6349-201ENSMUST00000184059 97 ntBASIC18.6■□□□□ 0.57
Cdh23Q99PF4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh23Q99PF4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh23Q99PF4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh23Q99PF4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh23Q99PF4 Gm27463-201ENSMUST00000183569 57 ntBASIC18.59■□□□□ 0.57
Cdh23Q99PF4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Cdh23Q99PF4 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.59■□□□□ 0.57
Cdh23Q99PF4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cdh23Q99PF4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh23Q99PF4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.59■□□□□ 0.57
Cdh23Q99PF4 Gm38027-201ENSMUST00000192315 235 ntBASIC18.59■□□□□ 0.57
Cdh23Q99PF4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh23Q99PF4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh23Q99PF4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.59■□□□□ 0.57
Cdh23Q99PF4 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh23Q99PF4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cdh23Q99PF4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Cdh23Q99PF4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdh23Q99PF4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
Cdh23Q99PF4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cdh23Q99PF4 Mzt1-203ENSMUST00000227948 952 ntBASIC18.58■□□□□ 0.57
Cdh23Q99PF4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh23Q99PF4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh23Q99PF4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Cdh23Q99PF4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.58■□□□□ 0.56
Cdh23Q99PF4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh23Q99PF4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Cdh23Q99PF4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh23Q99PF4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh23Q99PF4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh23Q99PF4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh23Q99PF4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh23Q99PF4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh23Q99PF4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cdh23Q99PF4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh23Q99PF4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.57■□□□□ 0.56
Cdh23Q99PF4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh23Q99PF4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh23Q99PF4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh23Q99PF4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cdh23Q99PF4 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.56■□□□□ 0.56
Cdh23Q99PF4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh23Q99PF4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cdh23Q99PF4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Cdh23Q99PF4 Gm21559-201ENSMUST00000220638 855 ntBASIC18.56■□□□□ 0.56
Cdh23Q99PF4 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.56■□□□□ 0.56
Cdh23Q99PF4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh23Q99PF4 Gm8587-201ENSMUST00000076538 843 ntBASIC18.56■□□□□ 0.56
Cdh23Q99PF4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cdh23Q99PF4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh23Q99PF4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh23Q99PF4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh23Q99PF4 Gm27357-201ENSMUST00000183754 135 ntBASIC18.56■□□□□ 0.56
Cdh23Q99PF4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.56■□□□□ 0.56
Cdh23Q99PF4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh23Q99PF4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.56■□□□□ 0.56
Cdh23Q99PF4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh23Q99PF4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh23Q99PF4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh23Q99PF4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh23Q99PF4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.56■□□□□ 0.56
Cdh23Q99PF4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh23Q99PF4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh23Q99PF4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
Cdh23Q99PF4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cdh23Q99PF4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh23Q99PF4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh23Q99PF4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh23Q99PF4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Cdh23Q99PF4 Gm9013-201ENSMUST00000132939 882 ntBASIC18.55■□□□□ 0.56
Cdh23Q99PF4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.55■□□□□ 0.56
Cdh23Q99PF4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.55■□□□□ 0.56
Cdh23Q99PF4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Cdh23Q99PF4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh23Q99PF4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.55■□□□□ 0.56
Cdh23Q99PF4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.55■□□□□ 0.56
Cdh23Q99PF4 Gm2274-201ENSMUST00000184539 609 ntBASIC18.55■□□□□ 0.56
Cdh23Q99PF4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.55■□□□□ 0.56
Cdh23Q99PF4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cdh23Q99PF4 Golph3-205ENSMUST00000228671 2842 ntBASIC18.54■□□□□ 0.56
Cdh23Q99PF4 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.54■□□□□ 0.56
Cdh23Q99PF4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh23Q99PF4 Gm7791-201ENSMUST00000219066 539 ntBASIC18.54■□□□□ 0.56
Cdh23Q99PF4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh23Q99PF4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh23Q99PF4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh23Q99PF4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh23Q99PF4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh23Q99PF4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh23Q99PF4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh23Q99PF4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms