Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Lysmd3Q99LE3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Lysmd3Q99LE3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd3Q99LE3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Lysmd3Q99LE3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd3Q99LE3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.78■□□□□ 0.6
Lysmd3Q99LE3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.78■□□□□ 0.6
Lysmd3Q99LE3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.78■□□□□ 0.6
Lysmd3Q99LE3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd3Q99LE3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd3Q99LE3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd3Q99LE3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd3Q99LE3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd3Q99LE3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd3Q99LE3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd3Q99LE3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Lysmd3Q99LE3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd3Q99LE3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd3Q99LE3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd3Q99LE3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd3Q99LE3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lysmd3Q99LE3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.77■□□□□ 0.6
Lysmd3Q99LE3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lysmd3Q99LE3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lysmd3Q99LE3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lysmd3Q99LE3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lysmd3Q99LE3 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.77■□□□□ 0.6
Lysmd3Q99LE3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lysmd3Q99LE3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.77■□□□□ 0.6
Lysmd3Q99LE3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.77■□□□□ 0.6
Lysmd3Q99LE3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lysmd3Q99LE3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lysmd3Q99LE3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lysmd3Q99LE3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.77■□□□□ 0.6
Lysmd3Q99LE3 Gm38285-201ENSMUST00000192928 922 ntBASIC18.77■□□□□ 0.6
Lysmd3Q99LE3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.77■□□□□ 0.6
Lysmd3Q99LE3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.77■□□□□ 0.6
Lysmd3Q99LE3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Lysmd3Q99LE3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lysmd3Q99LE3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Lysmd3Q99LE3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Lysmd3Q99LE3 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.76■□□□□ 0.59
Lysmd3Q99LE3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Lysmd3Q99LE3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lysmd3Q99LE3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lysmd3Q99LE3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Lysmd3Q99LE3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lysmd3Q99LE3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lysmd3Q99LE3 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.76■□□□□ 0.59
Lysmd3Q99LE3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lysmd3Q99LE3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lysmd3Q99LE3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lysmd3Q99LE3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lysmd3Q99LE3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.75■□□□□ 0.59
Lysmd3Q99LE3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lysmd3Q99LE3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lysmd3Q99LE3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.75■□□□□ 0.59
Lysmd3Q99LE3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Lysmd3Q99LE3 Gm10698-201ENSMUST00000182663 604 ntBASIC18.75■□□□□ 0.59
Lysmd3Q99LE3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.75■□□□□ 0.59
Lysmd3Q99LE3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.75■□□□□ 0.59
Lysmd3Q99LE3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lysmd3Q99LE3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lysmd3Q99LE3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lysmd3Q99LE3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lysmd3Q99LE3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lysmd3Q99LE3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.73■□□□□ 0.59
Lysmd3Q99LE3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lysmd3Q99LE3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Lysmd3Q99LE3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.73■□□□□ 0.59
Lysmd3Q99LE3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lysmd3Q99LE3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lysmd3Q99LE3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Lysmd3Q99LE3 Rarb-207ENSMUST00000225921 2756 ntBASIC18.73■□□□□ 0.59
Lysmd3Q99LE3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lysmd3Q99LE3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms