Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm43137-201ENSMUST00000198052 594 ntBASIC18.24■□□□□ 0.51
Cdk9Q99J95 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk9Q99J95 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk9Q99J95 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk9Q99J95 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk9Q99J95 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk9Q99J95 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk9Q99J95 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk9Q99J95 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk9Q99J95 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk9Q99J95 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk9Q99J95 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdk9Q99J95 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdk9Q99J95 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdk9Q99J95 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdk9Q99J95 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.23■□□□□ 0.51
Cdk9Q99J95 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdk9Q99J95 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdk9Q99J95 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Cdk9Q99J95 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdk9Q99J95 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cdk9Q99J95 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdk9Q99J95 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdk9Q99J95 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdk9Q99J95 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cdk9Q99J95 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdk9Q99J95 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdk9Q99J95 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Cdk9Q99J95 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdk9Q99J95 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdk9Q99J95 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cdk9Q99J95 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cdk9Q99J95 Spcs1-204ENSMUST00000226782 949 ntBASIC18.22■□□□□ 0.51
Cdk9Q99J95 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdk9Q99J95 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdk9Q99J95 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cdk9Q99J95 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdk9Q99J95 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdk9Q99J95 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdk9Q99J95 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdk9Q99J95 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdk9Q99J95 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cdk9Q99J95 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk9Q99J95 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cdk9Q99J95 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk9Q99J95 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk9Q99J95 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
Cdk9Q99J95 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk9Q99J95 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk9Q99J95 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cdk9Q99J95 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk9Q99J95 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk9Q99J95 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk9Q99J95 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk9Q99J95 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk9Q99J95 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk9Q99J95 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.21■□□□□ 0.51
Cdk9Q99J95 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.21■□□□□ 0.51
Cdk9Q99J95 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk9Q99J95 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk9Q99J95 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk9Q99J95 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk9Q99J95 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.21■□□□□ 0.51
Cdk9Q99J95 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk9Q99J95 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk9Q99J95 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk9Q99J95 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdk9Q99J95 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cdk9Q99J95 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cdk9Q99J95 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cdk9Q99J95 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk9Q99J95 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.2■□□□□ 0.5
Cdk9Q99J95 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk9Q99J95 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk9Q99J95 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk9Q99J95 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.2■□□□□ 0.5
Cdk9Q99J95 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cdk9Q99J95 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk9Q99J95 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cdk9Q99J95 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk9Q99J95 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk9Q99J95 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk9Q99J95 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk9Q99J95 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk9Q99J95 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk9Q99J95 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk9Q99J95 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk9Q99J95 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk9Q99J95 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cdk9Q99J95 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk9Q99J95 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk9Q99J95 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk9Q99J95 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk9Q99J95 Gm12251-201ENSMUST00000117893 792 ntBASIC18.19■□□□□ 0.5
Cdk9Q99J95 Gm7860-201ENSMUST00000121190 879 ntBASIC18.19■□□□□ 0.5
Cdk9Q99J95 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk9Q99J95 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.19■□□□□ 0.5
Cdk9Q99J95 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk9Q99J95 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cdk9Q99J95 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms