Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd1Q99J36 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd1Q99J36 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd1Q99J36 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd1Q99J36 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Thumpd1Q99J36 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Thumpd1Q99J36 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd1Q99J36 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd1Q99J36 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Thumpd1Q99J36 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd1Q99J36 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd1Q99J36 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd1Q99J36 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Thumpd1Q99J36 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd1Q99J36 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
Thumpd1Q99J36 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.18■□□□□ 0.18
Thumpd1Q99J36 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd1Q99J36 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd1Q99J36 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd1Q99J36 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd1Q99J36 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd1Q99J36 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.17■□□□□ 0.18
Thumpd1Q99J36 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd1Q99J36 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Thumpd1Q99J36 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.17■□□□□ 0.18
Thumpd1Q99J36 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd1Q99J36 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd1Q99J36 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.17■□□□□ 0.18
Thumpd1Q99J36 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd1Q99J36 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Thumpd1Q99J36 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd1Q99J36 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.17■□□□□ 0.18
Thumpd1Q99J36 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd1Q99J36 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd1Q99J36 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd1Q99J36 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.17■□□□□ 0.18
Thumpd1Q99J36 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Thumpd1Q99J36 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Thumpd1Q99J36 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.16■□□□□ 0.18
Thumpd1Q99J36 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.16■□□□□ 0.18
Thumpd1Q99J36 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Thumpd1Q99J36 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd1Q99J36 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd1Q99J36 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd1Q99J36 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd1Q99J36 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd1Q99J36 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd1Q99J36 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd1Q99J36 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Thumpd1Q99J36 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thumpd1Q99J36 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd1Q99J36 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd1Q99J36 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd1Q99J36 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Thumpd1Q99J36 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd1Q99J36 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Thumpd1Q99J36 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd1Q99J36 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.15■□□□□ 0.18
Thumpd1Q99J36 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd1Q99J36 Mir7075-201ENSMUST00000184187 82 ntBASIC16.15■□□□□ 0.18
Thumpd1Q99J36 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd1Q99J36 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd1Q99J36 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd1Q99J36 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd1Q99J36 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Thumpd1Q99J36 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd1Q99J36 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd1Q99J36 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.15■□□□□ 0.18
Thumpd1Q99J36 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thumpd1Q99J36 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Thumpd1Q99J36 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Thumpd1Q99J36 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.14■□□□□ 0.18
Thumpd1Q99J36 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thumpd1Q99J36 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thumpd1Q99J36 Gm38205-201ENSMUST00000192243 258 ntBASIC16.14■□□□□ 0.17
Thumpd1Q99J36 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.14■□□□□ 0.17
Thumpd1Q99J36 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.14■□□□□ 0.17
Thumpd1Q99J36 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thumpd1Q99J36 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thumpd1Q99J36 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Thumpd1Q99J36 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thumpd1Q99J36 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thumpd1Q99J36 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Thumpd1Q99J36 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thumpd1Q99J36 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Thumpd1Q99J36 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd1Q99J36 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd1Q99J36 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd1Q99J36 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd1Q99J36 Gm43173-201ENSMUST00000202246 593 ntBASIC16.13■□□□□ 0.17
Thumpd1Q99J36 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.13■□□□□ 0.17
Thumpd1Q99J36 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd1Q99J36 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd1Q99J36 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd1Q99J36 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd1Q99J36 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd1Q99J36 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd1Q99J36 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Thumpd1Q99J36 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd1Q99J36 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms