Protein–RNA interactions for Protein: Q91YK2

Rrp1b, Ribosomal RNA processing protein 1 homolog B, mousemouse

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1bQ91YK2 Gm11421-201ENSMUST00000122124 294 ntBASIC19.22■□□□□ 0.67
Rrp1bQ91YK2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rrp1bQ91YK2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrp1bQ91YK2 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.22■□□□□ 0.67
Rrp1bQ91YK2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rrp1bQ91YK2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrp1bQ91YK2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Rrp1bQ91YK2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrp1bQ91YK2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp1bQ91YK2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp1bQ91YK2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp1bQ91YK2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp1bQ91YK2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rrp1bQ91YK2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp1bQ91YK2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.21■□□□□ 0.67
Rrp1bQ91YK2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rrp1bQ91YK2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp1bQ91YK2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp1bQ91YK2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.21■□□□□ 0.67
Rrp1bQ91YK2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp1bQ91YK2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp1bQ91YK2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp1bQ91YK2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1bQ91YK2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1bQ91YK2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.2■□□□□ 0.66
Rrp1bQ91YK2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1bQ91YK2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1bQ91YK2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rrp1bQ91YK2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1bQ91YK2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1bQ91YK2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1bQ91YK2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1bQ91YK2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1bQ91YK2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1bQ91YK2 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.2■□□□□ 0.66
Rrp1bQ91YK2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1bQ91YK2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Rrp1bQ91YK2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.2■□□□□ 0.66
Rrp1bQ91YK2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.2■□□□□ 0.66
Rrp1bQ91YK2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1bQ91YK2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1bQ91YK2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1bQ91YK2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rrp1bQ91YK2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rrp1bQ91YK2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rrp1bQ91YK2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rrp1bQ91YK2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.19■□□□□ 0.66
Rrp1bQ91YK2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rrp1bQ91YK2 Gm43137-201ENSMUST00000198052 594 ntBASIC19.19■□□□□ 0.66
Rrp1bQ91YK2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rrp1bQ91YK2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Rrp1bQ91YK2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rrp1bQ91YK2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rrp1bQ91YK2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rrp1bQ91YK2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rrp1bQ91YK2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rrp1bQ91YK2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rrp1bQ91YK2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rrp1bQ91YK2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rrp1bQ91YK2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.18■□□□□ 0.66
Rrp1bQ91YK2 Smad6-203ENSMUST00000179458 273 ntBASIC19.18■□□□□ 0.66
Rrp1bQ91YK2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rrp1bQ91YK2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rrp1bQ91YK2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rrp1bQ91YK2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rrp1bQ91YK2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rrp1bQ91YK2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rrp1bQ91YK2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rrp1bQ91YK2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rrp1bQ91YK2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.18■□□□□ 0.66
Rrp1bQ91YK2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rrp1bQ91YK2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rrp1bQ91YK2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Rrp1bQ91YK2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Rrp1bQ91YK2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rrp1bQ91YK2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Rrp1bQ91YK2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.17■□□□□ 0.66
Rrp1bQ91YK2 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.17■□□□□ 0.66
Rrp1bQ91YK2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.17■□□□□ 0.66
Rrp1bQ91YK2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rrp1bQ91YK2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rrp1bQ91YK2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rrp1bQ91YK2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rrp1bQ91YK2 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.17■□□□□ 0.66
Rrp1bQ91YK2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Rrp1bQ91YK2 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.17■□□□□ 0.66
Rrp1bQ91YK2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Rrp1bQ91YK2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rrp1bQ91YK2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Rrp1bQ91YK2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.17■□□□□ 0.66
Rrp1bQ91YK2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rrp1bQ91YK2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rrp1bQ91YK2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rrp1bQ91YK2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.16■□□□□ 0.66
Rrp1bQ91YK2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rrp1bQ91YK2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rrp1bQ91YK2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rrp1bQ91YK2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.16■□□□□ 0.66
Rrp1bQ91YK2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rrp1bQ91YK2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms