Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Pcdha11Q91Y19 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha11Q91Y19 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha11Q91Y19 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha11Q91Y19 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha11Q91Y19 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha11Q91Y19 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha11Q91Y19 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha11Q91Y19 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha11Q91Y19 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha11Q91Y19 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha11Q91Y19 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha11Q91Y19 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha11Q91Y19 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha11Q91Y19 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha11Q91Y19 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha11Q91Y19 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha11Q91Y19 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha11Q91Y19 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha11Q91Y19 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.06■□□□□ 0.64
Pcdha11Q91Y19 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha11Q91Y19 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha11Q91Y19 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha11Q91Y19 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha11Q91Y19 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha11Q91Y19 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha11Q91Y19 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.05■□□□□ 0.64
Pcdha11Q91Y19 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha11Q91Y19 Zfp783-201ENSMUST00000095946 670 ntBASIC19.05■□□□□ 0.64
Pcdha11Q91Y19 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Pcdha11Q91Y19 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha11Q91Y19 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha11Q91Y19 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha11Q91Y19 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha11Q91Y19 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha11Q91Y19 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha11Q91Y19 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha11Q91Y19 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Pcdha11Q91Y19 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.04■□□□□ 0.64
Pcdha11Q91Y19 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha11Q91Y19 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdha11Q91Y19 Gm18666-201ENSMUST00000190039 958 ntBASIC19.04■□□□□ 0.64
Pcdha11Q91Y19 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha11Q91Y19 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha11Q91Y19 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha11Q91Y19 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdha11Q91Y19 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha11Q91Y19 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Pcdha11Q91Y19 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha11Q91Y19 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha11Q91Y19 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Pcdha11Q91Y19 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha11Q91Y19 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha11Q91Y19 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.03■□□□□ 0.64
Pcdha11Q91Y19 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha11Q91Y19 Gm13158-201ENSMUST00000122007 736 ntBASIC19.03■□□□□ 0.64
Pcdha11Q91Y19 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha11Q91Y19 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha11Q91Y19 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha11Q91Y19 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha11Q91Y19 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha11Q91Y19 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Pcdha11Q91Y19 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha11Q91Y19 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha11Q91Y19 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.02■□□□□ 0.64
Pcdha11Q91Y19 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha11Q91Y19 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha11Q91Y19 Gm5643-201ENSMUST00000117081 966 ntBASIC19.02■□□□□ 0.64
Pcdha11Q91Y19 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha11Q91Y19 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha11Q91Y19 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.02■□□□□ 0.64
Pcdha11Q91Y19 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha11Q91Y19 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.02■□□□□ 0.64
Pcdha11Q91Y19 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha11Q91Y19 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha11Q91Y19 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.02■□□□□ 0.63
Pcdha11Q91Y19 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdha11Q91Y19 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdha11Q91Y19 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.01■□□□□ 0.63
Pcdha11Q91Y19 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.01■□□□□ 0.63
Pcdha11Q91Y19 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.01■□□□□ 0.63
Pcdha11Q91Y19 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdha11Q91Y19 Gm38285-201ENSMUST00000192928 922 ntBASIC19.01■□□□□ 0.63
Pcdha11Q91Y19 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdha11Q91Y19 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.01■□□□□ 0.63
Pcdha11Q91Y19 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdha11Q91Y19 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdha11Q91Y19 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdha11Q91Y19 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdha11Q91Y19 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdha11Q91Y19 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Pcdha11Q91Y19 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19■□□□□ 0.63
Pcdha11Q91Y19 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19■□□□□ 0.63
Pcdha11Q91Y19 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Pcdha11Q91Y19 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdha11Q91Y19 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdha11Q91Y19 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdha11Q91Y19 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19■□□□□ 0.63
Pcdha11Q91Y19 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdha11Q91Y19 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms