Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb1Q91Y08 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhb1Q91Y08 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb1Q91Y08 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb1Q91Y08 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb1Q91Y08 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb1Q91Y08 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb1Q91Y08 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb1Q91Y08 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
Pcdhb1Q91Y08 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb1Q91Y08 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb1Q91Y08 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb1Q91Y08 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb1Q91Y08 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.85■□□□□ 0.61
Pcdhb1Q91Y08 Gm37179-201ENSMUST00000194862 823 ntBASIC18.85■□□□□ 0.61
Pcdhb1Q91Y08 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb1Q91Y08 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb1Q91Y08 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb1Q91Y08 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb1Q91Y08 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb1Q91Y08 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb1Q91Y08 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb1Q91Y08 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb1Q91Y08 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhb1Q91Y08 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.84■□□□□ 0.61
Pcdhb1Q91Y08 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb1Q91Y08 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhb1Q91Y08 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb1Q91Y08 Gm13148-201ENSMUST00000118892 745 ntBASIC18.84■□□□□ 0.61
Pcdhb1Q91Y08 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.84■□□□□ 0.61
Pcdhb1Q91Y08 Mir5133-201ENSMUST00000174955 77 ntBASIC18.84■□□□□ 0.61
Pcdhb1Q91Y08 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.84■□□□□ 0.61
Pcdhb1Q91Y08 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.84■□□□□ 0.61
Pcdhb1Q91Y08 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Pcdhb1Q91Y08 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Pcdhb1Q91Y08 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb1Q91Y08 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb1Q91Y08 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdhb1Q91Y08 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb1Q91Y08 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb1Q91Y08 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Pcdhb1Q91Y08 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb1Q91Y08 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.83■□□□□ 0.6
Pcdhb1Q91Y08 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.83■□□□□ 0.6
Pcdhb1Q91Y08 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb1Q91Y08 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.83■□□□□ 0.6
Pcdhb1Q91Y08 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb1Q91Y08 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb1Q91Y08 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Pcdhb1Q91Y08 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.83■□□□□ 0.6
Pcdhb1Q91Y08 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb1Q91Y08 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb1Q91Y08 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb1Q91Y08 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb1Q91Y08 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb1Q91Y08 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb1Q91Y08 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb1Q91Y08 Gm12933-201ENSMUST00000120203 872 ntBASIC18.82■□□□□ 0.6
Pcdhb1Q91Y08 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.82■□□□□ 0.6
Pcdhb1Q91Y08 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhb1Q91Y08 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.82■□□□□ 0.6
Pcdhb1Q91Y08 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb1Q91Y08 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhb1Q91Y08 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhb1Q91Y08 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.82■□□□□ 0.6
Pcdhb1Q91Y08 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhb1Q91Y08 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.82■□□□□ 0.6
Pcdhb1Q91Y08 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb1Q91Y08 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb1Q91Y08 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb1Q91Y08 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb1Q91Y08 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb1Q91Y08 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Pcdhb1Q91Y08 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb1Q91Y08 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb1Q91Y08 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pcdhb1Q91Y08 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb1Q91Y08 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb1Q91Y08 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdhb1Q91Y08 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb1Q91Y08 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb1Q91Y08 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb1Q91Y08 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb1Q91Y08 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb1Q91Y08 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Pcdhb1Q91Y08 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdhb1Q91Y08 Gm26524-201ENSMUST00000192339 390 ntBASIC18.8■□□□□ 0.6
Pcdhb1Q91Y08 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.8■□□□□ 0.6
Pcdhb1Q91Y08 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.8■□□□□ 0.6
Pcdhb1Q91Y08 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.8■□□□□ 0.6
Pcdhb1Q91Y08 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb1Q91Y08 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb1Q91Y08 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb1Q91Y08 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdhb1Q91Y08 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb1Q91Y08 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.8■□□□□ 0.6
Pcdhb1Q91Y08 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb1Q91Y08 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhb1Q91Y08 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhb1Q91Y08 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms