Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga6Q91XY2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhga6Q91XY2 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.98■□□□□ 0.47
Pcdhga6Q91XY2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.98■□□□□ 0.47
Pcdhga6Q91XY2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.98■□□□□ 0.47
Pcdhga6Q91XY2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhga6Q91XY2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga6Q91XY2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga6Q91XY2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga6Q91XY2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga6Q91XY2 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.98■□□□□ 0.47
Pcdhga6Q91XY2 Gm27741-201ENSMUST00000185060 237 ntBASIC17.98■□□□□ 0.47
Pcdhga6Q91XY2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga6Q91XY2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga6Q91XY2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga6Q91XY2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga6Q91XY2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga6Q91XY2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga6Q91XY2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga6Q91XY2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga6Q91XY2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga6Q91XY2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga6Q91XY2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga6Q91XY2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga6Q91XY2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga6Q91XY2 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.97■□□□□ 0.47
Pcdhga6Q91XY2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga6Q91XY2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga6Q91XY2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga6Q91XY2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga6Q91XY2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga6Q91XY2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.97■□□□□ 0.47
Pcdhga6Q91XY2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.97■□□□□ 0.47
Pcdhga6Q91XY2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga6Q91XY2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga6Q91XY2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhga6Q91XY2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga6Q91XY2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga6Q91XY2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga6Q91XY2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcdhga6Q91XY2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhga6Q91XY2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga6Q91XY2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga6Q91XY2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga6Q91XY2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga6Q91XY2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga6Q91XY2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga6Q91XY2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga6Q91XY2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhga6Q91XY2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhga6Q91XY2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga6Q91XY2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga6Q91XY2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga6Q91XY2 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.96■□□□□ 0.47
Pcdhga6Q91XY2 Gm30025-201ENSMUST00000218555 728 ntBASIC17.96■□□□□ 0.47
Pcdhga6Q91XY2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga6Q91XY2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.95■□□□□ 0.46
Pcdhga6Q91XY2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga6Q91XY2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.95■□□□□ 0.46
Pcdhga6Q91XY2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.95■□□□□ 0.46
Pcdhga6Q91XY2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga6Q91XY2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.95■□□□□ 0.46
Pcdhga6Q91XY2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdhga6Q91XY2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga6Q91XY2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhga6Q91XY2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga6Q91XY2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga6Q91XY2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga6Q91XY2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga6Q91XY2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Pcdhga6Q91XY2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga6Q91XY2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga6Q91XY2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga6Q91XY2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga6Q91XY2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.94■□□□□ 0.46
Pcdhga6Q91XY2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga6Q91XY2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.94■□□□□ 0.46
Pcdhga6Q91XY2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga6Q91XY2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga6Q91XY2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga6Q91XY2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga6Q91XY2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhga6Q91XY2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Pcdhga6Q91XY2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhga6Q91XY2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhga6Q91XY2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhga6Q91XY2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhga6Q91XY2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhga6Q91XY2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Pcdhga6Q91XY2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhga6Q91XY2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhga6Q91XY2 Gm6659-201ENSMUST00000174752 547 ntBASIC17.93■□□□□ 0.46
Pcdhga6Q91XY2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhga6Q91XY2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhga6Q91XY2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhga6Q91XY2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhga6Q91XY2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhga6Q91XY2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhga6Q91XY2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhga6Q91XY2 Flg-201ENSMUST00000050758 1488 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms