Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Vsx1Q91V10 Gm23634-201ENSMUST00000175071 91 ntBASIC17.93■□□□□ 0.46
Vsx1Q91V10 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Vsx1Q91V10 Gm3375-201ENSMUST00000203929 796 ntBASIC17.93■□□□□ 0.46
Vsx1Q91V10 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vsx1Q91V10 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vsx1Q91V10 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vsx1Q91V10 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.93■□□□□ 0.46
Vsx1Q91V10 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vsx1Q91V10 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vsx1Q91V10 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.93■□□□□ 0.46
Vsx1Q91V10 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vsx1Q91V10 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vsx1Q91V10 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vsx1Q91V10 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vsx1Q91V10 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vsx1Q91V10 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vsx1Q91V10 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Vsx1Q91V10 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Vsx1Q91V10 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.92■□□□□ 0.46
Vsx1Q91V10 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vsx1Q91V10 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Vsx1Q91V10 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vsx1Q91V10 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vsx1Q91V10 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vsx1Q91V10 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vsx1Q91V10 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vsx1Q91V10 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vsx1Q91V10 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vsx1Q91V10 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vsx1Q91V10 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.91■□□□□ 0.46
Vsx1Q91V10 Gm42545-201ENSMUST00000202755 922 ntBASIC17.91■□□□□ 0.46
Vsx1Q91V10 Gm18025-201ENSMUST00000221733 862 ntBASIC17.91■□□□□ 0.46
Vsx1Q91V10 Odf3b-204ENSMUST00000227834 930 ntBASIC17.91■□□□□ 0.46
Vsx1Q91V10 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vsx1Q91V10 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vsx1Q91V10 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vsx1Q91V10 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vsx1Q91V10 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vsx1Q91V10 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vsx1Q91V10 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vsx1Q91V10 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.91■□□□□ 0.46
Vsx1Q91V10 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vsx1Q91V10 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vsx1Q91V10 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.9■□□□□ 0.46
Vsx1Q91V10 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vsx1Q91V10 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vsx1Q91V10 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vsx1Q91V10 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vsx1Q91V10 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Vsx1Q91V10 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vsx1Q91V10 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vsx1Q91V10 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vsx1Q91V10 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vsx1Q91V10 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Vsx1Q91V10 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vsx1Q91V10 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vsx1Q91V10 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Vsx1Q91V10 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.89■□□□□ 0.45
Vsx1Q91V10 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vsx1Q91V10 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Vsx1Q91V10 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.89■□□□□ 0.45
Vsx1Q91V10 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vsx1Q91V10 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vsx1Q91V10 Gm6345-202ENSMUST00000180900 204 ntBASIC17.89■□□□□ 0.45
Vsx1Q91V10 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.89■□□□□ 0.45
Vsx1Q91V10 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vsx1Q91V10 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vsx1Q91V10 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Vsx1Q91V10 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vsx1Q91V10 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vsx1Q91V10 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vsx1Q91V10 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vsx1Q91V10 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vsx1Q91V10 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.88■□□□□ 0.45
Vsx1Q91V10 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vsx1Q91V10 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vsx1Q91V10 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vsx1Q91V10 Golph3-205ENSMUST00000228671 2842 ntBASIC17.88■□□□□ 0.45
Vsx1Q91V10 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vsx1Q91V10 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Vsx1Q91V10 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Vsx1Q91V10 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.88■□□□□ 0.45
Vsx1Q91V10 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vsx1Q91V10 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vsx1Q91V10 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vsx1Q91V10 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vsx1Q91V10 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vsx1Q91V10 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vsx1Q91V10 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vsx1Q91V10 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vsx1Q91V10 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vsx1Q91V10 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vsx1Q91V10 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vsx1Q91V10 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vsx1Q91V10 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vsx1Q91V10 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.87■□□□□ 0.45
Vsx1Q91V10 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.87■□□□□ 0.45
Vsx1Q91V10 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vsx1Q91V10 Timm23-208ENSMUST00000226683 750 ntBASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms