Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SfpqQ8VIJ6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SfpqQ8VIJ6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SfpqQ8VIJ6 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.16■□□□□ 0.66
SfpqQ8VIJ6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.16■□□□□ 0.66
SfpqQ8VIJ6 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.16■□□□□ 0.66
SfpqQ8VIJ6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SfpqQ8VIJ6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.16■□□□□ 0.66
SfpqQ8VIJ6 Gm6139-201ENSMUST00000079261 882 ntBASIC19.16■□□□□ 0.66
SfpqQ8VIJ6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SfpqQ8VIJ6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SfpqQ8VIJ6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SfpqQ8VIJ6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SfpqQ8VIJ6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.16■□□□□ 0.66
SfpqQ8VIJ6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SfpqQ8VIJ6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.16■□□□□ 0.66
SfpqQ8VIJ6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SfpqQ8VIJ6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SfpqQ8VIJ6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SfpqQ8VIJ6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SfpqQ8VIJ6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SfpqQ8VIJ6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
SfpqQ8VIJ6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SfpqQ8VIJ6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SfpqQ8VIJ6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SfpqQ8VIJ6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SfpqQ8VIJ6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SfpqQ8VIJ6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SfpqQ8VIJ6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SfpqQ8VIJ6 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SfpqQ8VIJ6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SfpqQ8VIJ6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
SfpqQ8VIJ6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SfpqQ8VIJ6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SfpqQ8VIJ6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SfpqQ8VIJ6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SfpqQ8VIJ6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SfpqQ8VIJ6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SfpqQ8VIJ6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SfpqQ8VIJ6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SfpqQ8VIJ6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SfpqQ8VIJ6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SfpqQ8VIJ6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SfpqQ8VIJ6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SfpqQ8VIJ6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.14■□□□□ 0.65
SfpqQ8VIJ6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.14■□□□□ 0.65
SfpqQ8VIJ6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SfpqQ8VIJ6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SfpqQ8VIJ6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SfpqQ8VIJ6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.14■□□□□ 0.65
SfpqQ8VIJ6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SfpqQ8VIJ6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SfpqQ8VIJ6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SfpqQ8VIJ6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.13■□□□□ 0.65
SfpqQ8VIJ6 Gm27454-201ENSMUST00000185090 204 ntBASIC19.13■□□□□ 0.65
SfpqQ8VIJ6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SfpqQ8VIJ6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SfpqQ8VIJ6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SfpqQ8VIJ6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SfpqQ8VIJ6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
SfpqQ8VIJ6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SfpqQ8VIJ6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SfpqQ8VIJ6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.13■□□□□ 0.65
SfpqQ8VIJ6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SfpqQ8VIJ6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SfpqQ8VIJ6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SfpqQ8VIJ6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SfpqQ8VIJ6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SfpqQ8VIJ6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SfpqQ8VIJ6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SfpqQ8VIJ6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SfpqQ8VIJ6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SfpqQ8VIJ6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SfpqQ8VIJ6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SfpqQ8VIJ6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SfpqQ8VIJ6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SfpqQ8VIJ6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.11■□□□□ 0.65
SfpqQ8VIJ6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SfpqQ8VIJ6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
SfpqQ8VIJ6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.11■□□□□ 0.65
SfpqQ8VIJ6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SfpqQ8VIJ6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SfpqQ8VIJ6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SfpqQ8VIJ6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.11■□□□□ 0.65
SfpqQ8VIJ6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SfpqQ8VIJ6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SfpqQ8VIJ6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SfpqQ8VIJ6 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SfpqQ8VIJ6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.1■□□□□ 0.65
SfpqQ8VIJ6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SfpqQ8VIJ6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SfpqQ8VIJ6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SfpqQ8VIJ6 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.1■□□□□ 0.65
SfpqQ8VIJ6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SfpqQ8VIJ6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SfpqQ8VIJ6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SfpqQ8VIJ6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SfpqQ8VIJ6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SfpqQ8VIJ6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SfpqQ8VIJ6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms