Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdhr1Q8VHP6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdhr1Q8VHP6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdhr1Q8VHP6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdhr1Q8VHP6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdhr1Q8VHP6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cdhr1Q8VHP6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdhr1Q8VHP6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cdhr1Q8VHP6 Gm37055-201ENSMUST00000191866 133 ntBASIC17.66■□□□□ 0.42
Cdhr1Q8VHP6 Gm38285-201ENSMUST00000192928 922 ntBASIC17.66■□□□□ 0.42
Cdhr1Q8VHP6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdhr1Q8VHP6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdhr1Q8VHP6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdhr1Q8VHP6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdhr1Q8VHP6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdhr1Q8VHP6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdhr1Q8VHP6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Cdhr1Q8VHP6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdhr1Q8VHP6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdhr1Q8VHP6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdhr1Q8VHP6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdhr1Q8VHP6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cdhr1Q8VHP6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.65■□□□□ 0.42
Cdhr1Q8VHP6 Gm10138-203ENSMUST00000206952 366 ntBASIC17.65■□□□□ 0.42
Cdhr1Q8VHP6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdhr1Q8VHP6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdhr1Q8VHP6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.65■□□□□ 0.42
Cdhr1Q8VHP6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdhr1Q8VHP6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.65■□□□□ 0.42
Cdhr1Q8VHP6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdhr1Q8VHP6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cdhr1Q8VHP6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdhr1Q8VHP6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.64■□□□□ 0.41
Cdhr1Q8VHP6 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.64■□□□□ 0.41
Cdhr1Q8VHP6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cdhr1Q8VHP6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cdhr1Q8VHP6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.64■□□□□ 0.41
Cdhr1Q8VHP6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.64■□□□□ 0.41
Cdhr1Q8VHP6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdhr1Q8VHP6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdhr1Q8VHP6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.64■□□□□ 0.41
Cdhr1Q8VHP6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdhr1Q8VHP6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdhr1Q8VHP6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cdhr1Q8VHP6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdhr1Q8VHP6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdhr1Q8VHP6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cdhr1Q8VHP6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.63■□□□□ 0.41
Cdhr1Q8VHP6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdhr1Q8VHP6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cdhr1Q8VHP6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Cdhr1Q8VHP6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cdhr1Q8VHP6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.63■□□□□ 0.41
Cdhr1Q8VHP6 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.63■□□□□ 0.41
Cdhr1Q8VHP6 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cdhr1Q8VHP6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdhr1Q8VHP6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cdhr1Q8VHP6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdhr1Q8VHP6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdhr1Q8VHP6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdhr1Q8VHP6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdhr1Q8VHP6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdhr1Q8VHP6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdhr1Q8VHP6 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdhr1Q8VHP6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdhr1Q8VHP6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdhr1Q8VHP6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdhr1Q8VHP6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdhr1Q8VHP6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdhr1Q8VHP6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdhr1Q8VHP6 Gm15375-201ENSMUST00000119510 849 ntBASIC17.62■□□□□ 0.41
Cdhr1Q8VHP6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.62■□□□□ 0.41
Cdhr1Q8VHP6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.62■□□□□ 0.41
Cdhr1Q8VHP6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdhr1Q8VHP6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.62■□□□□ 0.41
Cdhr1Q8VHP6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdhr1Q8VHP6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cdhr1Q8VHP6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.62■□□□□ 0.41
Cdhr1Q8VHP6 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.62■□□□□ 0.41
Cdhr1Q8VHP6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdhr1Q8VHP6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdhr1Q8VHP6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdhr1Q8VHP6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdhr1Q8VHP6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Cdhr1Q8VHP6 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdhr1Q8VHP6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdhr1Q8VHP6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdhr1Q8VHP6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cdhr1Q8VHP6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdhr1Q8VHP6 Gm15565-201ENSMUST00000118890 427 ntBASIC17.61■□□□□ 0.41
Cdhr1Q8VHP6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.61■□□□□ 0.41
Cdhr1Q8VHP6 Gm43183-201ENSMUST00000200632 547 ntBASIC17.61■□□□□ 0.41
Cdhr1Q8VHP6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdhr1Q8VHP6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdhr1Q8VHP6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdhr1Q8VHP6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
Cdhr1Q8VHP6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cdhr1Q8VHP6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdhr1Q8VHP6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdhr1Q8VHP6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms