Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lmcd1Q8VEE1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lmcd1Q8VEE1 Golph3-202ENSMUST00000226517 2359 ntBASIC19.33■□□□□ 0.69
Lmcd1Q8VEE1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lmcd1Q8VEE1 Gm13474-201ENSMUST00000122466 815 ntBASIC19.33■□□□□ 0.68
Lmcd1Q8VEE1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.33■□□□□ 0.68
Lmcd1Q8VEE1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lmcd1Q8VEE1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lmcd1Q8VEE1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Lmcd1Q8VEE1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lmcd1Q8VEE1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lmcd1Q8VEE1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lmcd1Q8VEE1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Lmcd1Q8VEE1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lmcd1Q8VEE1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lmcd1Q8VEE1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lmcd1Q8VEE1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lmcd1Q8VEE1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Lmcd1Q8VEE1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lmcd1Q8VEE1 Gm6443-201ENSMUST00000203599 874 ntBASIC19.32■□□□□ 0.68
Lmcd1Q8VEE1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.32■□□□□ 0.68
Lmcd1Q8VEE1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lmcd1Q8VEE1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lmcd1Q8VEE1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lmcd1Q8VEE1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Lmcd1Q8VEE1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.32■□□□□ 0.68
Lmcd1Q8VEE1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Lmcd1Q8VEE1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.32■□□□□ 0.68
Lmcd1Q8VEE1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lmcd1Q8VEE1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.31■□□□□ 0.68
Lmcd1Q8VEE1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lmcd1Q8VEE1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lmcd1Q8VEE1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lmcd1Q8VEE1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lmcd1Q8VEE1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.31■□□□□ 0.68
Lmcd1Q8VEE1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Lmcd1Q8VEE1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Lmcd1Q8VEE1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lmcd1Q8VEE1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lmcd1Q8VEE1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lmcd1Q8VEE1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.31■□□□□ 0.68
Lmcd1Q8VEE1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lmcd1Q8VEE1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lmcd1Q8VEE1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.3■□□□□ 0.68
Lmcd1Q8VEE1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lmcd1Q8VEE1 Gm27389-201ENSMUST00000183622 195 ntBASIC19.3■□□□□ 0.68
Lmcd1Q8VEE1 Gm29518-201ENSMUST00000190858 372 ntBASIC19.3■□□□□ 0.68
Lmcd1Q8VEE1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lmcd1Q8VEE1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lmcd1Q8VEE1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lmcd1Q8VEE1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lmcd1Q8VEE1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lmcd1Q8VEE1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lmcd1Q8VEE1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lmcd1Q8VEE1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lmcd1Q8VEE1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lmcd1Q8VEE1 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.29■□□□□ 0.68
Lmcd1Q8VEE1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lmcd1Q8VEE1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lmcd1Q8VEE1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lmcd1Q8VEE1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Lmcd1Q8VEE1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lmcd1Q8VEE1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.29■□□□□ 0.68
Lmcd1Q8VEE1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.29■□□□□ 0.68
Lmcd1Q8VEE1 Gm21559-201ENSMUST00000220638 855 ntBASIC19.29■□□□□ 0.68
Lmcd1Q8VEE1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.29■□□□□ 0.68
Lmcd1Q8VEE1 Gm8587-201ENSMUST00000076538 843 ntBASIC19.29■□□□□ 0.68
Lmcd1Q8VEE1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lmcd1Q8VEE1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lmcd1Q8VEE1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lmcd1Q8VEE1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lmcd1Q8VEE1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.28■□□□□ 0.68
Lmcd1Q8VEE1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lmcd1Q8VEE1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lmcd1Q8VEE1 Mzt1-203ENSMUST00000227948 952 ntBASIC19.28■□□□□ 0.68
Lmcd1Q8VEE1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Lmcd1Q8VEE1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lmcd1Q8VEE1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lmcd1Q8VEE1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lmcd1Q8VEE1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lmcd1Q8VEE1 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.27■□□□□ 0.68
Lmcd1Q8VEE1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lmcd1Q8VEE1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lmcd1Q8VEE1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lmcd1Q8VEE1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lmcd1Q8VEE1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Lmcd1Q8VEE1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lmcd1Q8VEE1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Lmcd1Q8VEE1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lmcd1Q8VEE1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Lmcd1Q8VEE1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.26■□□□□ 0.67
Lmcd1Q8VEE1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Lmcd1Q8VEE1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lmcd1Q8VEE1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.26■□□□□ 0.67
Lmcd1Q8VEE1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lmcd1Q8VEE1 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lmcd1Q8VEE1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lmcd1Q8VEE1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lmcd1Q8VEE1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lmcd1Q8VEE1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms