Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkd2Q8VE28 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.24
Nkd2Q8VE28 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkd2Q8VE28 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.52■□□□□ 0.24
Nkd2Q8VE28 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkd2Q8VE28 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkd2Q8VE28 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkd2Q8VE28 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkd2Q8VE28 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Nkd2Q8VE28 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nkd2Q8VE28 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nkd2Q8VE28 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nkd2Q8VE28 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nkd2Q8VE28 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nkd2Q8VE28 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Nkd2Q8VE28 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.51■□□□□ 0.23
Nkd2Q8VE28 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Nkd2Q8VE28 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.51■□□□□ 0.23
Nkd2Q8VE28 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.51■□□□□ 0.23
Nkd2Q8VE28 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.51■□□□□ 0.23
Nkd2Q8VE28 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.51■□□□□ 0.23
Nkd2Q8VE28 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.51■□□□□ 0.23
Nkd2Q8VE28 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Nkd2Q8VE28 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nkd2Q8VE28 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nkd2Q8VE28 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nkd2Q8VE28 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nkd2Q8VE28 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nkd2Q8VE28 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Nkd2Q8VE28 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Nkd2Q8VE28 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Nkd2Q8VE28 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Nkd2Q8VE28 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkd2Q8VE28 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkd2Q8VE28 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nkd2Q8VE28 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkd2Q8VE28 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkd2Q8VE28 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkd2Q8VE28 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nkd2Q8VE28 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nkd2Q8VE28 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkd2Q8VE28 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nkd2Q8VE28 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.5■□□□□ 0.23
Nkd2Q8VE28 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkd2Q8VE28 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nkd2Q8VE28 Gm10812-201ENSMUST00000099864 546 ntBASIC16.5■□□□□ 0.23
Nkd2Q8VE28 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkd2Q8VE28 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkd2Q8VE28 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
Nkd2Q8VE28 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkd2Q8VE28 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkd2Q8VE28 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkd2Q8VE28 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkd2Q8VE28 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.49■□□□□ 0.23
Nkd2Q8VE28 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkd2Q8VE28 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkd2Q8VE28 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.49■□□□□ 0.23
Nkd2Q8VE28 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nkd2Q8VE28 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.49■□□□□ 0.23
Nkd2Q8VE28 Gm37856-201ENSMUST00000191634 999 ntBASIC16.49■□□□□ 0.23
Nkd2Q8VE28 Gm26524-201ENSMUST00000192339 390 ntBASIC16.49■□□□□ 0.23
Nkd2Q8VE28 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nkd2Q8VE28 Gm10252-201ENSMUST00000209541 832 ntBASIC16.49■□□□□ 0.23
Nkd2Q8VE28 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkd2Q8VE28 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Nkd2Q8VE28 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkd2Q8VE28 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.49■□□□□ 0.23
Nkd2Q8VE28 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkd2Q8VE28 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Nkd2Q8VE28 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nkd2Q8VE28 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nkd2Q8VE28 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkd2Q8VE28 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkd2Q8VE28 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkd2Q8VE28 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Nkd2Q8VE28 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Nkd2Q8VE28 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nkd2Q8VE28 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkd2Q8VE28 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Nkd2Q8VE28 Gm7860-201ENSMUST00000121190 879 ntBASIC16.48■□□□□ 0.23
Nkd2Q8VE28 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkd2Q8VE28 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkd2Q8VE28 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Nkd2Q8VE28 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nkd2Q8VE28 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkd2Q8VE28 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.48■□□□□ 0.23
Nkd2Q8VE28 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkd2Q8VE28 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Nkd2Q8VE28 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkd2Q8VE28 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkd2Q8VE28 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkd2Q8VE28 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.47■□□□□ 0.23
Nkd2Q8VE28 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkd2Q8VE28 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Nkd2Q8VE28 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.47■□□□□ 0.23
Nkd2Q8VE28 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkd2Q8VE28 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nkd2Q8VE28 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkd2Q8VE28 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.47■□□□□ 0.23
Nkd2Q8VE28 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms