Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Q8VDP2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q8VDP2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q8VDP2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q8VDP2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.68■□□□□ 0.42
Q8VDP2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Q8VDP2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q8VDP2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Q8VDP2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q8VDP2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Q8VDP2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Q8VDP2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q8VDP2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Q8VDP2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Q8VDP2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q8VDP2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q8VDP2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Q8VDP2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q8VDP2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q8VDP2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Q8VDP2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q8VDP2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.67■□□□□ 0.42
Q8VDP2 Gm10232-201ENSMUST00000089221 720 ntBASIC17.67■□□□□ 0.42
Q8VDP2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Q8VDP2 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q8VDP2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.67■□□□□ 0.42
Q8VDP2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Q8VDP2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Q8VDP2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Q8VDP2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Q8VDP2 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q8VDP2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q8VDP2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q8VDP2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Q8VDP2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q8VDP2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Q8VDP2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Q8VDP2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q8VDP2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Q8VDP2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Q8VDP2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Q8VDP2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Q8VDP2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
Q8VDP2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.65■□□□□ 0.42
Q8VDP2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Q8VDP2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Q8VDP2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.65■□□□□ 0.42
Q8VDP2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Q8VDP2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Q8VDP2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Q8VDP2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
Q8VDP2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q8VDP2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q8VDP2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q8VDP2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q8VDP2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Q8VDP2 Gm45102-201ENSMUST00000207427 857 ntBASIC17.64■□□□□ 0.41
Q8VDP2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q8VDP2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Q8VDP2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q8VDP2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q8VDP2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Q8VDP2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Q8VDP2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q8VDP2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q8VDP2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q8VDP2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Q8VDP2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Q8VDP2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q8VDP2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Q8VDP2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q8VDP2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q8VDP2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q8VDP2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q8VDP2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Q8VDP2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q8VDP2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q8VDP2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q8VDP2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Q8VDP2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q8VDP2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Q8VDP2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Q8VDP2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q8VDP2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Q8VDP2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.62■□□□□ 0.41
Q8VDP2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q8VDP2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q8VDP2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q8VDP2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q8VDP2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q8VDP2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Q8VDP2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.62■□□□□ 0.41
Q8VDP2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q8VDP2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.61■□□□□ 0.41
Q8VDP2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q8VDP2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.61■□□□□ 0.41
Q8VDP2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q8VDP2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Q8VDP2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.61■□□□□ 0.41
Q8VDP2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms