Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Uhrf1Q8VDF2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Uhrf1Q8VDF2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.76■□□□□ 0.59
Uhrf1Q8VDF2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Uhrf1Q8VDF2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Uhrf1Q8VDF2 Gm23634-201ENSMUST00000175071 91 ntBASIC18.76■□□□□ 0.59
Uhrf1Q8VDF2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.76■□□□□ 0.59
Uhrf1Q8VDF2 Gm18032-201ENSMUST00000222541 538 ntBASIC18.76■□□□□ 0.59
Uhrf1Q8VDF2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Uhrf1Q8VDF2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Uhrf1Q8VDF2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Uhrf1Q8VDF2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Uhrf1Q8VDF2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Uhrf1Q8VDF2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.76■□□□□ 0.59
Uhrf1Q8VDF2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Uhrf1Q8VDF2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Uhrf1Q8VDF2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Uhrf1Q8VDF2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Uhrf1Q8VDF2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Uhrf1Q8VDF2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Uhrf1Q8VDF2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Uhrf1Q8VDF2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Uhrf1Q8VDF2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Uhrf1Q8VDF2 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.75■□□□□ 0.59
Uhrf1Q8VDF2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Uhrf1Q8VDF2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Uhrf1Q8VDF2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.74■□□□□ 0.59
Uhrf1Q8VDF2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Uhrf1Q8VDF2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Uhrf1Q8VDF2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Uhrf1Q8VDF2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Uhrf1Q8VDF2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Uhrf1Q8VDF2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Uhrf1Q8VDF2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.74■□□□□ 0.59
Uhrf1Q8VDF2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.74■□□□□ 0.59
Uhrf1Q8VDF2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.74■□□□□ 0.59
Uhrf1Q8VDF2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Uhrf1Q8VDF2 Gm27463-201ENSMUST00000183569 57 ntBASIC18.74■□□□□ 0.59
Uhrf1Q8VDF2 Gm45058-201ENSMUST00000205810 766 ntBASIC18.74■□□□□ 0.59
Uhrf1Q8VDF2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.74■□□□□ 0.59
Uhrf1Q8VDF2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Uhrf1Q8VDF2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Uhrf1Q8VDF2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Uhrf1Q8VDF2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Uhrf1Q8VDF2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Uhrf1Q8VDF2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Uhrf1Q8VDF2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Uhrf1Q8VDF2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Uhrf1Q8VDF2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Uhrf1Q8VDF2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Uhrf1Q8VDF2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Uhrf1Q8VDF2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Uhrf1Q8VDF2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Uhrf1Q8VDF2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Uhrf1Q8VDF2 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.73■□□□□ 0.59
Uhrf1Q8VDF2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.73■□□□□ 0.59
Uhrf1Q8VDF2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Uhrf1Q8VDF2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Uhrf1Q8VDF2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Uhrf1Q8VDF2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Uhrf1Q8VDF2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Uhrf1Q8VDF2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Uhrf1Q8VDF2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Uhrf1Q8VDF2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Uhrf1Q8VDF2 Gm10013-201ENSMUST00000106074 672 ntBASIC18.72■□□□□ 0.59
Uhrf1Q8VDF2 Gm12085-201ENSMUST00000119263 940 ntBASIC18.72■□□□□ 0.59
Uhrf1Q8VDF2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.72■□□□□ 0.59
Uhrf1Q8VDF2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.72■□□□□ 0.59
Uhrf1Q8VDF2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.72■□□□□ 0.59
Uhrf1Q8VDF2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Uhrf1Q8VDF2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Uhrf1Q8VDF2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Uhrf1Q8VDF2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Uhrf1Q8VDF2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Uhrf1Q8VDF2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Uhrf1Q8VDF2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Uhrf1Q8VDF2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
Uhrf1Q8VDF2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Uhrf1Q8VDF2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Uhrf1Q8VDF2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Uhrf1Q8VDF2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Uhrf1Q8VDF2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Uhrf1Q8VDF2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Uhrf1Q8VDF2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Uhrf1Q8VDF2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Uhrf1Q8VDF2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Uhrf1Q8VDF2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Uhrf1Q8VDF2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Uhrf1Q8VDF2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Uhrf1Q8VDF2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Uhrf1Q8VDF2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Uhrf1Q8VDF2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Uhrf1Q8VDF2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Uhrf1Q8VDF2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Uhrf1Q8VDF2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Uhrf1Q8VDF2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.7■□□□□ 0.58
Uhrf1Q8VDF2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Uhrf1Q8VDF2 Gm10517-202ENSMUST00000192970 758 ntBASIC18.7■□□□□ 0.58
Uhrf1Q8VDF2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Uhrf1Q8VDF2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 224 ms