Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a20aQ8VDB9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Slc6a20aQ8VDB9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a20aQ8VDB9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a20aQ8VDB9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a20aQ8VDB9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a20aQ8VDB9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a20aQ8VDB9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Slc6a20aQ8VDB9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a20aQ8VDB9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a20aQ8VDB9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Slc6a20aQ8VDB9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a20aQ8VDB9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a20aQ8VDB9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Slc6a20aQ8VDB9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a20aQ8VDB9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a20aQ8VDB9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Slc6a20aQ8VDB9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Slc6a20aQ8VDB9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Slc6a20aQ8VDB9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a20aQ8VDB9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a20aQ8VDB9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.88■□□□□ 0.45
Slc6a20aQ8VDB9 Gm6365-201ENSMUST00000054711 744 ntBASIC17.88■□□□□ 0.45
Slc6a20aQ8VDB9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a20aQ8VDB9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a20aQ8VDB9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a20aQ8VDB9 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.88■□□□□ 0.45
Slc6a20aQ8VDB9 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.88■□□□□ 0.45
Slc6a20aQ8VDB9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a20aQ8VDB9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a20aQ8VDB9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a20aQ8VDB9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a20aQ8VDB9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Slc6a20aQ8VDB9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a20aQ8VDB9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Slc6a20aQ8VDB9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a20aQ8VDB9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Slc6a20aQ8VDB9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a20aQ8VDB9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a20aQ8VDB9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a20aQ8VDB9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a20aQ8VDB9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a20aQ8VDB9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.87■□□□□ 0.45
Slc6a20aQ8VDB9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Slc6a20aQ8VDB9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20aQ8VDB9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20aQ8VDB9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Slc6a20aQ8VDB9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20aQ8VDB9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20aQ8VDB9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.86■□□□□ 0.45
Slc6a20aQ8VDB9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20aQ8VDB9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20aQ8VDB9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20aQ8VDB9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20aQ8VDB9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.86■□□□□ 0.45
Slc6a20aQ8VDB9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Slc6a20aQ8VDB9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20aQ8VDB9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20aQ8VDB9 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.86■□□□□ 0.45
Slc6a20aQ8VDB9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Slc6a20aQ8VDB9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20aQ8VDB9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20aQ8VDB9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20aQ8VDB9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.85■□□□□ 0.45
Slc6a20aQ8VDB9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.85■□□□□ 0.45
Slc6a20aQ8VDB9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a20aQ8VDB9 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.85■□□□□ 0.45
Slc6a20aQ8VDB9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a20aQ8VDB9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a20aQ8VDB9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.85■□□□□ 0.45
Slc6a20aQ8VDB9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.85■□□□□ 0.45
Slc6a20aQ8VDB9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.85■□□□□ 0.45
Slc6a20aQ8VDB9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Slc6a20aQ8VDB9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a20aQ8VDB9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a20aQ8VDB9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a20aQ8VDB9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a20aQ8VDB9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a20aQ8VDB9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.84■□□□□ 0.45
Slc6a20aQ8VDB9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a20aQ8VDB9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a20aQ8VDB9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.84■□□□□ 0.45
Slc6a20aQ8VDB9 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.84■□□□□ 0.45
Slc6a20aQ8VDB9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Slc6a20aQ8VDB9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a20aQ8VDB9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a20aQ8VDB9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a20aQ8VDB9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc6a20aQ8VDB9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Slc6a20aQ8VDB9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc6a20aQ8VDB9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc6a20aQ8VDB9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Slc6a20aQ8VDB9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc6a20aQ8VDB9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a20aQ8VDB9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Slc6a20aQ8VDB9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a20aQ8VDB9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a20aQ8VDB9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a20aQ8VDB9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a20aQ8VDB9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms