Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sgms1Q8VCQ6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.61■□□□□ 0.73
Sgms1Q8VCQ6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.61■□□□□ 0.73
Sgms1Q8VCQ6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sgms1Q8VCQ6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Sgms1Q8VCQ6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sgms1Q8VCQ6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.61■□□□□ 0.73
Sgms1Q8VCQ6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
Sgms1Q8VCQ6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sgms1Q8VCQ6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sgms1Q8VCQ6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sgms1Q8VCQ6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Sgms1Q8VCQ6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sgms1Q8VCQ6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Sgms1Q8VCQ6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sgms1Q8VCQ6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sgms1Q8VCQ6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sgms1Q8VCQ6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sgms1Q8VCQ6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sgms1Q8VCQ6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sgms1Q8VCQ6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sgms1Q8VCQ6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sgms1Q8VCQ6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sgms1Q8VCQ6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Sgms1Q8VCQ6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Sgms1Q8VCQ6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sgms1Q8VCQ6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.59■□□□□ 0.73
Sgms1Q8VCQ6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sgms1Q8VCQ6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Sgms1Q8VCQ6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sgms1Q8VCQ6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sgms1Q8VCQ6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sgms1Q8VCQ6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sgms1Q8VCQ6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sgms1Q8VCQ6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Sgms1Q8VCQ6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sgms1Q8VCQ6 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Sgms1Q8VCQ6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Sgms1Q8VCQ6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sgms1Q8VCQ6 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.58■□□□□ 0.73
Sgms1Q8VCQ6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sgms1Q8VCQ6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sgms1Q8VCQ6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sgms1Q8VCQ6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Sgms1Q8VCQ6 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.58■□□□□ 0.72
Sgms1Q8VCQ6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sgms1Q8VCQ6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sgms1Q8VCQ6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sgms1Q8VCQ6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sgms1Q8VCQ6 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sgms1Q8VCQ6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sgms1Q8VCQ6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sgms1Q8VCQ6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sgms1Q8VCQ6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sgms1Q8VCQ6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sgms1Q8VCQ6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sgms1Q8VCQ6 Gm27011-201ENSMUST00000182352 972 ntBASIC19.57■□□□□ 0.72
Sgms1Q8VCQ6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Sgms1Q8VCQ6 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.57■□□□□ 0.72
Sgms1Q8VCQ6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Sgms1Q8VCQ6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sgms1Q8VCQ6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Sgms1Q8VCQ6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sgms1Q8VCQ6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sgms1Q8VCQ6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sgms1Q8VCQ6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.56■□□□□ 0.72
Sgms1Q8VCQ6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sgms1Q8VCQ6 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.56■□□□□ 0.72
Sgms1Q8VCQ6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sgms1Q8VCQ6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sgms1Q8VCQ6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sgms1Q8VCQ6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sgms1Q8VCQ6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sgms1Q8VCQ6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sgms1Q8VCQ6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sgms1Q8VCQ6 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sgms1Q8VCQ6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sgms1Q8VCQ6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.55■□□□□ 0.72
Sgms1Q8VCQ6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.55■□□□□ 0.72
Sgms1Q8VCQ6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.55■□□□□ 0.72
Sgms1Q8VCQ6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sgms1Q8VCQ6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sgms1Q8VCQ6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sgms1Q8VCQ6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sgms1Q8VCQ6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sgms1Q8VCQ6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sgms1Q8VCQ6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sgms1Q8VCQ6 Gm13148-201ENSMUST00000118892 745 ntBASIC19.54■□□□□ 0.72
Sgms1Q8VCQ6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sgms1Q8VCQ6 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Sgms1Q8VCQ6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sgms1Q8VCQ6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sgms1Q8VCQ6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sgms1Q8VCQ6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sgms1Q8VCQ6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sgms1Q8VCQ6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Sgms1Q8VCQ6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Sgms1Q8VCQ6 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sgms1Q8VCQ6 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sgms1Q8VCQ6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms