Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Dnajc28Q8VCE1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Dnajc28Q8VCE1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Dnajc28Q8VCE1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Dnajc28Q8VCE1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Dnajc28Q8VCE1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dnajc28Q8VCE1 Gm13836-201ENSMUST00000121159 501 ntBASIC19.72■□□□□ 0.75
Dnajc28Q8VCE1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dnajc28Q8VCE1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dnajc28Q8VCE1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.72■□□□□ 0.75
Dnajc28Q8VCE1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dnajc28Q8VCE1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dnajc28Q8VCE1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.72■□□□□ 0.75
Dnajc28Q8VCE1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Dnajc28Q8VCE1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dnajc28Q8VCE1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dnajc28Q8VCE1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dnajc28Q8VCE1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Dnajc28Q8VCE1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Dnajc28Q8VCE1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.71■□□□□ 0.75
Dnajc28Q8VCE1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Dnajc28Q8VCE1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dnajc28Q8VCE1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Dnajc28Q8VCE1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.71■□□□□ 0.75
Dnajc28Q8VCE1 Gm7977-201ENSMUST00000193787 748 ntBASIC19.71■□□□□ 0.75
Dnajc28Q8VCE1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dnajc28Q8VCE1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Dnajc28Q8VCE1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Dnajc28Q8VCE1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dnajc28Q8VCE1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Dnajc28Q8VCE1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dnajc28Q8VCE1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dnajc28Q8VCE1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Dnajc28Q8VCE1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dnajc28Q8VCE1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dnajc28Q8VCE1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dnajc28Q8VCE1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dnajc28Q8VCE1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Dnajc28Q8VCE1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dnajc28Q8VCE1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dnajc28Q8VCE1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dnajc28Q8VCE1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dnajc28Q8VCE1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dnajc28Q8VCE1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dnajc28Q8VCE1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dnajc28Q8VCE1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.7■□□□□ 0.74
Dnajc28Q8VCE1 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.7■□□□□ 0.74
Dnajc28Q8VCE1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Dnajc28Q8VCE1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dnajc28Q8VCE1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Dnajc28Q8VCE1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Dnajc28Q8VCE1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Dnajc28Q8VCE1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Dnajc28Q8VCE1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Dnajc28Q8VCE1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.69■□□□□ 0.74
Dnajc28Q8VCE1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.69■□□□□ 0.74
Dnajc28Q8VCE1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Dnajc28Q8VCE1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.69■□□□□ 0.74
Dnajc28Q8VCE1 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.69■□□□□ 0.74
Dnajc28Q8VCE1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Dnajc28Q8VCE1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Dnajc28Q8VCE1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.69■□□□□ 0.74
Dnajc28Q8VCE1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Dnajc28Q8VCE1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Flg-201ENSMUST00000050758 1488 ntBASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dnajc28Q8VCE1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dnajc28Q8VCE1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Dnajc28Q8VCE1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dnajc28Q8VCE1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dnajc28Q8VCE1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dnajc28Q8VCE1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.67■□□□□ 0.74
Dnajc28Q8VCE1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms