Protein–RNA interactions for Protein: Q8VCD7

Kdm4c, Lysine-specific demethylase 4C, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm4cQ8VCD7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Kdm4cQ8VCD7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Kdm4cQ8VCD7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
Kdm4cQ8VCD7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Kdm4cQ8VCD7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Kdm4cQ8VCD7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Kdm4cQ8VCD7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Kdm4cQ8VCD7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Kdm4cQ8VCD7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Kdm4cQ8VCD7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Kdm4cQ8VCD7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Kdm4cQ8VCD7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
Kdm4cQ8VCD7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Kdm4cQ8VCD7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Kdm4cQ8VCD7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Kdm4cQ8VCD7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Kdm4cQ8VCD7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Kdm4cQ8VCD7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.37■■□□□ 1.01
Kdm4cQ8VCD7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.37■■□□□ 1.01
Kdm4cQ8VCD7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Kdm4cQ8VCD7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Kdm4cQ8VCD7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Kdm4cQ8VCD7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Kdm4cQ8VCD7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Kdm4cQ8VCD7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Kdm4cQ8VCD7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Kdm4cQ8VCD7 Reep4-203ENSMUST00000226563 1444 ntBASIC21.37■■□□□ 1.01
Kdm4cQ8VCD7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Kdm4cQ8VCD7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Kdm4cQ8VCD7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Kdm4cQ8VCD7 Gm43548-201ENSMUST00000197139 2353 ntBASIC21.36■■□□□ 1.01
Kdm4cQ8VCD7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Kdm4cQ8VCD7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Kdm4cQ8VCD7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Kdm4cQ8VCD7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Kdm4cQ8VCD7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Kdm4cQ8VCD7 Idnk-204ENSMUST00000226010 1898 ntBASIC21.36■■□□□ 1.01
Kdm4cQ8VCD7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Kdm4cQ8VCD7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.36■■□□□ 1.01
Kdm4cQ8VCD7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Kdm4cQ8VCD7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Kdm4cQ8VCD7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Kdm4cQ8VCD7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.35■■□□□ 1.01
Kdm4cQ8VCD7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Kdm4cQ8VCD7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Kdm4cQ8VCD7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Kdm4cQ8VCD7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Kdm4cQ8VCD7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Kdm4cQ8VCD7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.35■■□□□ 1.01
Kdm4cQ8VCD7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.35■■□□□ 1.01
Kdm4cQ8VCD7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC21.35■■□□□ 1.01
Kdm4cQ8VCD7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Kdm4cQ8VCD7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.35■■□□□ 1.01
Kdm4cQ8VCD7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Kdm4cQ8VCD7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Kdm4cQ8VCD7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Kdm4cQ8VCD7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Kdm4cQ8VCD7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Kdm4cQ8VCD7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Kdm4cQ8VCD7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Kdm4cQ8VCD7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Kdm4cQ8VCD7 Gm43338-201ENSMUST00000198617 2223 ntBASIC21.34■■□□□ 1.01
Kdm4cQ8VCD7 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.34■■□□□ 1.01
Kdm4cQ8VCD7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Kdm4cQ8VCD7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Kdm4cQ8VCD7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Kdm4cQ8VCD7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Kdm4cQ8VCD7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Kdm4cQ8VCD7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Kdm4cQ8VCD7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Kdm4cQ8VCD7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.33■■□□□ 1.01
Kdm4cQ8VCD7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Kdm4cQ8VCD7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Kdm4cQ8VCD7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Kdm4cQ8VCD7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Kdm4cQ8VCD7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.33■■□□□ 1.01
Kdm4cQ8VCD7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.33■■□□□ 1.01
Kdm4cQ8VCD7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Kdm4cQ8VCD7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Kdm4cQ8VCD7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC21.33■■□□□ 1.01
Kdm4cQ8VCD7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Kdm4cQ8VCD7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.33■■□□□ 1
Kdm4cQ8VCD7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kdm4cQ8VCD7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kdm4cQ8VCD7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kdm4cQ8VCD7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kdm4cQ8VCD7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Kdm4cQ8VCD7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kdm4cQ8VCD7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.32■■□□□ 1
Kdm4cQ8VCD7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.32■■□□□ 1
Kdm4cQ8VCD7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kdm4cQ8VCD7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.32■■□□□ 1
Kdm4cQ8VCD7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kdm4cQ8VCD7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Kdm4cQ8VCD7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Kdm4cQ8VCD7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC21.32■■□□□ 1
Kdm4cQ8VCD7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kdm4cQ8VCD7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Kdm4cQ8VCD7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Kdm4cQ8VCD7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms