Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ndc1Q8VCB1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.09■□□□□ 0.33
Ndc1Q8VCB1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndc1Q8VCB1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndc1Q8VCB1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndc1Q8VCB1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndc1Q8VCB1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndc1Q8VCB1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndc1Q8VCB1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndc1Q8VCB1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndc1Q8VCB1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndc1Q8VCB1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndc1Q8VCB1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ndc1Q8VCB1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndc1Q8VCB1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndc1Q8VCB1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ndc1Q8VCB1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ndc1Q8VCB1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ndc1Q8VCB1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.08■□□□□ 0.32
Ndc1Q8VCB1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ndc1Q8VCB1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ndc1Q8VCB1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ndc1Q8VCB1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ndc1Q8VCB1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ndc1Q8VCB1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ndc1Q8VCB1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndc1Q8VCB1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndc1Q8VCB1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndc1Q8VCB1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ndc1Q8VCB1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndc1Q8VCB1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ndc1Q8VCB1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndc1Q8VCB1 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.07■□□□□ 0.32
Ndc1Q8VCB1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndc1Q8VCB1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.07■□□□□ 0.32
Ndc1Q8VCB1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ndc1Q8VCB1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndc1Q8VCB1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndc1Q8VCB1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ndc1Q8VCB1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndc1Q8VCB1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndc1Q8VCB1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndc1Q8VCB1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ndc1Q8VCB1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ndc1Q8VCB1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ndc1Q8VCB1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ndc1Q8VCB1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ndc1Q8VCB1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ndc1Q8VCB1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ndc1Q8VCB1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ndc1Q8VCB1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
Ndc1Q8VCB1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ndc1Q8VCB1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ndc1Q8VCB1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.06■□□□□ 0.32
Ndc1Q8VCB1 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.06■□□□□ 0.32
Ndc1Q8VCB1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ndc1Q8VCB1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ndc1Q8VCB1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ndc1Q8VCB1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ndc1Q8VCB1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ndc1Q8VCB1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Ndc1Q8VCB1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ndc1Q8VCB1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ndc1Q8VCB1 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.05■□□□□ 0.32
Ndc1Q8VCB1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ndc1Q8VCB1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ndc1Q8VCB1 BC021767-201ENSMUST00000126387 1716 ntBASIC17.05■□□□□ 0.32
Ndc1Q8VCB1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ndc1Q8VCB1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ndc1Q8VCB1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ndc1Q8VCB1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.05■□□□□ 0.32
Ndc1Q8VCB1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Ndc1Q8VCB1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ndc1Q8VCB1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ndc1Q8VCB1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ndc1Q8VCB1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ndc1Q8VCB1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ndc1Q8VCB1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ndc1Q8VCB1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ndc1Q8VCB1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ndc1Q8VCB1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ndc1Q8VCB1 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.04■□□□□ 0.32
Ndc1Q8VCB1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ndc1Q8VCB1 Gm18666-201ENSMUST00000190039 958 ntBASIC17.04■□□□□ 0.32
Ndc1Q8VCB1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ndc1Q8VCB1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ndc1Q8VCB1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ndc1Q8VCB1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ndc1Q8VCB1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ndc1Q8VCB1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ndc1Q8VCB1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ndc1Q8VCB1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.03■□□□□ 0.32
Ndc1Q8VCB1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ndc1Q8VCB1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ndc1Q8VCB1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ndc1Q8VCB1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ndc1Q8VCB1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ndc1Q8VCB1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.03■□□□□ 0.32
Ndc1Q8VCB1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ndc1Q8VCB1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms