Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3kbp1Q8R550 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3kbp1Q8R550 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3kbp1Q8R550 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3kbp1Q8R550 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3kbp1Q8R550 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3kbp1Q8R550 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.68■□□□□ 0.58
Sh3kbp1Q8R550 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3kbp1Q8R550 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3kbp1Q8R550 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3kbp1Q8R550 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3kbp1Q8R550 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3kbp1Q8R550 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3kbp1Q8R550 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3kbp1Q8R550 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.67■□□□□ 0.58
Sh3kbp1Q8R550 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3kbp1Q8R550 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3kbp1Q8R550 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.67■□□□□ 0.58
Sh3kbp1Q8R550 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.67■□□□□ 0.58
Sh3kbp1Q8R550 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3kbp1Q8R550 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Sh3kbp1Q8R550 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.67■□□□□ 0.58
Sh3kbp1Q8R550 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3kbp1Q8R550 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3kbp1Q8R550 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3kbp1Q8R550 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3kbp1Q8R550 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Sh3kbp1Q8R550 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sh3kbp1Q8R550 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Sh3kbp1Q8R550 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3kbp1Q8R550 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3kbp1Q8R550 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3kbp1Q8R550 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.66■□□□□ 0.58
Sh3kbp1Q8R550 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3kbp1Q8R550 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Sh3kbp1Q8R550 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Sh3kbp1Q8R550 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3kbp1Q8R550 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.66■□□□□ 0.58
Sh3kbp1Q8R550 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Sh3kbp1Q8R550 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3kbp1Q8R550 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3kbp1Q8R550 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3kbp1Q8R550 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3kbp1Q8R550 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3kbp1Q8R550 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3kbp1Q8R550 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3kbp1Q8R550 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3kbp1Q8R550 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3kbp1Q8R550 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3kbp1Q8R550 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3kbp1Q8R550 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Sh3kbp1Q8R550 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.65■□□□□ 0.58
Sh3kbp1Q8R550 Gm2559-201ENSMUST00000201323 363 ntBASIC18.65■□□□□ 0.58
Sh3kbp1Q8R550 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3kbp1Q8R550 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3kbp1Q8R550 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3kbp1Q8R550 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Sh3kbp1Q8R550 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Sh3kbp1Q8R550 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3kbp1Q8R550 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3kbp1Q8R550 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sh3kbp1Q8R550 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.64■□□□□ 0.57
Sh3kbp1Q8R550 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3kbp1Q8R550 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.64■□□□□ 0.57
Sh3kbp1Q8R550 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.64■□□□□ 0.57
Sh3kbp1Q8R550 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3kbp1Q8R550 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.64■□□□□ 0.57
Sh3kbp1Q8R550 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3kbp1Q8R550 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3kbp1Q8R550 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3kbp1Q8R550 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Sh3kbp1Q8R550 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3kbp1Q8R550 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3kbp1Q8R550 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3kbp1Q8R550 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3kbp1Q8R550 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.63■□□□□ 0.57
Sh3kbp1Q8R550 Gm5643-201ENSMUST00000117081 966 ntBASIC18.63■□□□□ 0.57
Sh3kbp1Q8R550 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.63■□□□□ 0.57
Sh3kbp1Q8R550 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sh3kbp1Q8R550 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3kbp1Q8R550 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Sh3kbp1Q8R550 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3kbp1Q8R550 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3kbp1Q8R550 Dio3-201ENSMUST00000097228 1449 ntBASIC18.63■□□□□ 0.57
Sh3kbp1Q8R550 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Sh3kbp1Q8R550 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.63■□□□□ 0.57
Sh3kbp1Q8R550 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3kbp1Q8R550 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.63■□□□□ 0.57
Sh3kbp1Q8R550 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3kbp1Q8R550 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3kbp1Q8R550 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3kbp1Q8R550 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3kbp1Q8R550 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3kbp1Q8R550 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3kbp1Q8R550 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3kbp1Q8R550 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3kbp1Q8R550 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3kbp1Q8R550 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Sh3kbp1Q8R550 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3kbp1Q8R550 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms