Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna3Q8R4G9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna3Q8R4G9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.82■□□□□ 0.44
Chrna3Q8R4G9 Gm22240-201ENSMUST00000175225 82 ntBASIC17.82■□□□□ 0.44
Chrna3Q8R4G9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.82■□□□□ 0.44
Chrna3Q8R4G9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna3Q8R4G9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna3Q8R4G9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna3Q8R4G9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna3Q8R4G9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna3Q8R4G9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna3Q8R4G9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna3Q8R4G9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna3Q8R4G9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna3Q8R4G9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna3Q8R4G9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna3Q8R4G9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Chrna3Q8R4G9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna3Q8R4G9 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.81■□□□□ 0.44
Chrna3Q8R4G9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.81■□□□□ 0.44
Chrna3Q8R4G9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.81■□□□□ 0.44
Chrna3Q8R4G9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna3Q8R4G9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna3Q8R4G9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna3Q8R4G9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.81■□□□□ 0.44
Chrna3Q8R4G9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.81■□□□□ 0.44
Chrna3Q8R4G9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.81■□□□□ 0.44
Chrna3Q8R4G9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna3Q8R4G9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna3Q8R4G9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna3Q8R4G9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna3Q8R4G9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.8■□□□□ 0.44
Chrna3Q8R4G9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna3Q8R4G9 Gm11249-201ENSMUST00000117071 859 ntBASIC17.8■□□□□ 0.44
Chrna3Q8R4G9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna3Q8R4G9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna3Q8R4G9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna3Q8R4G9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Chrna3Q8R4G9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.8■□□□□ 0.44
Chrna3Q8R4G9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna3Q8R4G9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna3Q8R4G9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna3Q8R4G9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna3Q8R4G9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna3Q8R4G9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna3Q8R4G9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Chrna3Q8R4G9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Chrna3Q8R4G9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna3Q8R4G9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.79■□□□□ 0.44
Chrna3Q8R4G9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna3Q8R4G9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.79■□□□□ 0.44
Chrna3Q8R4G9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna3Q8R4G9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna3Q8R4G9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Chrna3Q8R4G9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna3Q8R4G9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna3Q8R4G9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna3Q8R4G9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna3Q8R4G9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna3Q8R4G9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna3Q8R4G9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna3Q8R4G9 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.78■□□□□ 0.44
Chrna3Q8R4G9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Chrna3Q8R4G9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna3Q8R4G9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Chrna3Q8R4G9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna3Q8R4G9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna3Q8R4G9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
Chrna3Q8R4G9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna3Q8R4G9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.77■□□□□ 0.44
Chrna3Q8R4G9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chrna3Q8R4G9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chrna3Q8R4G9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
Chrna3Q8R4G9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chrna3Q8R4G9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chrna3Q8R4G9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chrna3Q8R4G9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chrna3Q8R4G9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chrna3Q8R4G9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chrna3Q8R4G9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Chrna3Q8R4G9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chrna3Q8R4G9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chrna3Q8R4G9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chrna3Q8R4G9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna3Q8R4G9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.76■□□□□ 0.43
Chrna3Q8R4G9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Chrna3Q8R4G9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna3Q8R4G9 Gm11927-201ENSMUST00000118472 759 ntBASIC17.76■□□□□ 0.43
Chrna3Q8R4G9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Chrna3Q8R4G9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna3Q8R4G9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna3Q8R4G9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna3Q8R4G9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna3Q8R4G9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna3Q8R4G9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna3Q8R4G9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna3Q8R4G9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna3Q8R4G9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Chrna3Q8R4G9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna3Q8R4G9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms