Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdt1Q8R4E9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdt1Q8R4E9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdt1Q8R4E9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cdt1Q8R4E9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Cdt1Q8R4E9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Cdt1Q8R4E9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Cdt1Q8R4E9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdt1Q8R4E9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdt1Q8R4E9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdt1Q8R4E9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdt1Q8R4E9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdt1Q8R4E9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Cdt1Q8R4E9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Cdt1Q8R4E9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cdt1Q8R4E9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdt1Q8R4E9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdt1Q8R4E9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cdt1Q8R4E9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdt1Q8R4E9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdt1Q8R4E9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdt1Q8R4E9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdt1Q8R4E9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdt1Q8R4E9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cdt1Q8R4E9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.51■□□□□ 0.39
Cdt1Q8R4E9 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.51■□□□□ 0.39
Cdt1Q8R4E9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cdt1Q8R4E9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cdt1Q8R4E9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdt1Q8R4E9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Cdt1Q8R4E9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdt1Q8R4E9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdt1Q8R4E9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdt1Q8R4E9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdt1Q8R4E9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cdt1Q8R4E9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cdt1Q8R4E9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdt1Q8R4E9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Cdt1Q8R4E9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdt1Q8R4E9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdt1Q8R4E9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdt1Q8R4E9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdt1Q8R4E9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdt1Q8R4E9 Gm12896-201ENSMUST00000118430 226 ntBASIC17.5■□□□□ 0.39
Cdt1Q8R4E9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Cdt1Q8R4E9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.5■□□□□ 0.39
Cdt1Q8R4E9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdt1Q8R4E9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdt1Q8R4E9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdt1Q8R4E9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdt1Q8R4E9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdt1Q8R4E9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdt1Q8R4E9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdt1Q8R4E9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdt1Q8R4E9 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.49■□□□□ 0.39
Cdt1Q8R4E9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.49■□□□□ 0.39
Cdt1Q8R4E9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdt1Q8R4E9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdt1Q8R4E9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdt1Q8R4E9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdt1Q8R4E9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdt1Q8R4E9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cdt1Q8R4E9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.49■□□□□ 0.39
Cdt1Q8R4E9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdt1Q8R4E9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdt1Q8R4E9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdt1Q8R4E9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdt1Q8R4E9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdt1Q8R4E9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Cdt1Q8R4E9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdt1Q8R4E9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Cdt1Q8R4E9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdt1Q8R4E9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.48■□□□□ 0.39
Cdt1Q8R4E9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.48■□□□□ 0.39
Cdt1Q8R4E9 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.48■□□□□ 0.39
Cdt1Q8R4E9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdt1Q8R4E9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cdt1Q8R4E9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdt1Q8R4E9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdt1Q8R4E9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdt1Q8R4E9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdt1Q8R4E9 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.48■□□□□ 0.39
Cdt1Q8R4E9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdt1Q8R4E9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdt1Q8R4E9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdt1Q8R4E9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cdt1Q8R4E9 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.47■□□□□ 0.39
Cdt1Q8R4E9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdt1Q8R4E9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cdt1Q8R4E9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cdt1Q8R4E9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdt1Q8R4E9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdt1Q8R4E9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Cdt1Q8R4E9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.47■□□□□ 0.39
Cdt1Q8R4E9 Gm5643-201ENSMUST00000117081 966 ntBASIC17.47■□□□□ 0.39
Cdt1Q8R4E9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cdt1Q8R4E9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.47■□□□□ 0.39
Cdt1Q8R4E9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdt1Q8R4E9 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.47■□□□□ 0.39
Cdt1Q8R4E9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms