Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp2a1Q8R429 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp2a1Q8R429 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.25■□□□□ 0.83
Atp2a1Q8R429 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.25■□□□□ 0.83
Atp2a1Q8R429 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Atp2a1Q8R429 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Atp2a1Q8R429 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.25■□□□□ 0.83
Atp2a1Q8R429 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.25■□□□□ 0.83
Atp2a1Q8R429 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Atp2a1Q8R429 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Atp2a1Q8R429 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.25■□□□□ 0.83
Atp2a1Q8R429 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp2a1Q8R429 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp2a1Q8R429 Mtag2-201ENSMUST00000058665 714 ntBASIC20.25■□□□□ 0.83
Atp2a1Q8R429 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Atp2a1Q8R429 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp2a1Q8R429 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Atp2a1Q8R429 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.25■□□□□ 0.83
Atp2a1Q8R429 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Atp2a1Q8R429 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp2a1Q8R429 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp2a1Q8R429 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.24■□□□□ 0.83
Atp2a1Q8R429 Gm10138-203ENSMUST00000206952 366 ntBASIC20.24■□□□□ 0.83
Atp2a1Q8R429 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp2a1Q8R429 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp2a1Q8R429 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp2a1Q8R429 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.24■□□□□ 0.83
Atp2a1Q8R429 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Atp2a1Q8R429 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Atp2a1Q8R429 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Atp2a1Q8R429 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Atp2a1Q8R429 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp2a1Q8R429 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.24■□□□□ 0.83
Atp2a1Q8R429 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Atp2a1Q8R429 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp2a1Q8R429 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Atp2a1Q8R429 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Atp2a1Q8R429 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp2a1Q8R429 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp2a1Q8R429 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp2a1Q8R429 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.23■□□□□ 0.83
Atp2a1Q8R429 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp2a1Q8R429 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp2a1Q8R429 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.23■□□□□ 0.83
Atp2a1Q8R429 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp2a1Q8R429 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Atp2a1Q8R429 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Atp2a1Q8R429 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp2a1Q8R429 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp2a1Q8R429 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.22■□□□□ 0.83
Atp2a1Q8R429 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp2a1Q8R429 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Atp2a1Q8R429 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Atp2a1Q8R429 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.22■□□□□ 0.83
Atp2a1Q8R429 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.22■□□□□ 0.83
Atp2a1Q8R429 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Atp2a1Q8R429 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Atp2a1Q8R429 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp2a1Q8R429 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp2a1Q8R429 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Atp2a1Q8R429 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp2a1Q8R429 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Atp2a1Q8R429 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.21■□□□□ 0.83
Atp2a1Q8R429 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.21■□□□□ 0.83
Atp2a1Q8R429 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp2a1Q8R429 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Atp2a1Q8R429 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp2a1Q8R429 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp2a1Q8R429 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp2a1Q8R429 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Atp2a1Q8R429 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Atp2a1Q8R429 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Atp2a1Q8R429 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp2a1Q8R429 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp2a1Q8R429 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp2a1Q8R429 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Atp2a1Q8R429 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Atp2a1Q8R429 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Atp2a1Q8R429 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.2■□□□□ 0.82
Atp2a1Q8R429 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.2■□□□□ 0.82
Atp2a1Q8R429 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Atp2a1Q8R429 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.2■□□□□ 0.82
Atp2a1Q8R429 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Atp2a1Q8R429 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp2a1Q8R429 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp2a1Q8R429 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp2a1Q8R429 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Atp2a1Q8R429 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp2a1Q8R429 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp2a1Q8R429 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp2a1Q8R429 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Atp2a1Q8R429 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.19■□□□□ 0.82
Atp2a1Q8R429 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.19■□□□□ 0.82
Atp2a1Q8R429 Gm37055-201ENSMUST00000191866 133 ntBASIC20.19■□□□□ 0.82
Atp2a1Q8R429 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.19■□□□□ 0.82
Atp2a1Q8R429 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp2a1Q8R429 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp2a1Q8R429 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.19■□□□□ 0.82
Atp2a1Q8R429 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp2a1Q8R429 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms