Protein–RNA interactions for Protein: Q8R1U2

Cgref1, Cell growth regulator with EF hand domain protein 1, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgref1Q8R1U2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cgref1Q8R1U2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cgref1Q8R1U2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cgref1Q8R1U2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cgref1Q8R1U2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cgref1Q8R1U2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.4■□□□□ 0.54
Cgref1Q8R1U2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cgref1Q8R1U2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cgref1Q8R1U2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cgref1Q8R1U2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cgref1Q8R1U2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cgref1Q8R1U2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cgref1Q8R1U2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cgref1Q8R1U2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cgref1Q8R1U2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.4■□□□□ 0.54
Cgref1Q8R1U2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cgref1Q8R1U2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cgref1Q8R1U2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cgref1Q8R1U2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cgref1Q8R1U2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cgref1Q8R1U2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cgref1Q8R1U2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cgref1Q8R1U2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cgref1Q8R1U2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Cgref1Q8R1U2 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.39■□□□□ 0.54
Cgref1Q8R1U2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Cgref1Q8R1U2 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.39■□□□□ 0.54
Cgref1Q8R1U2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cgref1Q8R1U2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cgref1Q8R1U2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cgref1Q8R1U2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.39■□□□□ 0.53
Cgref1Q8R1U2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cgref1Q8R1U2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cgref1Q8R1U2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cgref1Q8R1U2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cgref1Q8R1U2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cgref1Q8R1U2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cgref1Q8R1U2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cgref1Q8R1U2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cgref1Q8R1U2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cgref1Q8R1U2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cgref1Q8R1U2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cgref1Q8R1U2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cgref1Q8R1U2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cgref1Q8R1U2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cgref1Q8R1U2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cgref1Q8R1U2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cgref1Q8R1U2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cgref1Q8R1U2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cgref1Q8R1U2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cgref1Q8R1U2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cgref1Q8R1U2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
Cgref1Q8R1U2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cgref1Q8R1U2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cgref1Q8R1U2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cgref1Q8R1U2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cgref1Q8R1U2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cgref1Q8R1U2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cgref1Q8R1U2 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.37■□□□□ 0.53
Cgref1Q8R1U2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cgref1Q8R1U2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cgref1Q8R1U2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cgref1Q8R1U2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cgref1Q8R1U2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cgref1Q8R1U2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cgref1Q8R1U2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cgref1Q8R1U2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cgref1Q8R1U2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cgref1Q8R1U2 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.37■□□□□ 0.53
Cgref1Q8R1U2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cgref1Q8R1U2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cgref1Q8R1U2 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.36■□□□□ 0.53
Cgref1Q8R1U2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cgref1Q8R1U2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
Cgref1Q8R1U2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cgref1Q8R1U2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cgref1Q8R1U2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cgref1Q8R1U2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.36■□□□□ 0.53
Cgref1Q8R1U2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cgref1Q8R1U2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cgref1Q8R1U2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cgref1Q8R1U2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cgref1Q8R1U2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cgref1Q8R1U2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cgref1Q8R1U2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
Cgref1Q8R1U2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cgref1Q8R1U2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cgref1Q8R1U2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cgref1Q8R1U2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cgref1Q8R1U2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.35■□□□□ 0.53
Cgref1Q8R1U2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cgref1Q8R1U2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cgref1Q8R1U2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cgref1Q8R1U2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.35■□□□□ 0.53
Cgref1Q8R1U2 Golgb1-201ENSMUST00000023534 498 ntBASIC18.35■□□□□ 0.53
Cgref1Q8R1U2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cgref1Q8R1U2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cgref1Q8R1U2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cgref1Q8R1U2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cgref1Q8R1U2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms