Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Chmp7Q8R1T1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Chmp7Q8R1T1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Chmp7Q8R1T1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Chmp7Q8R1T1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Chmp7Q8R1T1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Chmp7Q8R1T1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Chmp7Q8R1T1 Gm10654-201ENSMUST00000098653 1633 ntBASIC23.25■■□□□ 1.31
Chmp7Q8R1T1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Chmp7Q8R1T1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Chmp7Q8R1T1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC23.24■■□□□ 1.31
Chmp7Q8R1T1 Gm11539-201ENSMUST00000119837 557 ntBASIC23.24■■□□□ 1.31
Chmp7Q8R1T1 Gm13436-201ENSMUST00000120418 567 ntBASIC23.24■■□□□ 1.31
Chmp7Q8R1T1 Gm13559-201ENSMUST00000120476 863 ntBASIC23.24■■□□□ 1.31
Chmp7Q8R1T1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC23.24■■□□□ 1.31
Chmp7Q8R1T1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC23.24■■□□□ 1.31
Chmp7Q8R1T1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC23.24■■□□□ 1.31
Chmp7Q8R1T1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Chmp7Q8R1T1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC23.24■■□□□ 1.31
Chmp7Q8R1T1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Chmp7Q8R1T1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Chmp7Q8R1T1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Chmp7Q8R1T1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Chmp7Q8R1T1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Chmp7Q8R1T1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC23.23■■□□□ 1.31
Chmp7Q8R1T1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
Chmp7Q8R1T1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Chmp7Q8R1T1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Chmp7Q8R1T1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Chmp7Q8R1T1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC23.23■■□□□ 1.31
Chmp7Q8R1T1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Chmp7Q8R1T1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Chmp7Q8R1T1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Chmp7Q8R1T1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Chmp7Q8R1T1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
Chmp7Q8R1T1 Rncr4-201ENSMUST00000194541 2234 ntBASIC23.23■■□□□ 1.31
Chmp7Q8R1T1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Chmp7Q8R1T1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Chmp7Q8R1T1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC23.22■■□□□ 1.31
Chmp7Q8R1T1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Chmp7Q8R1T1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Chmp7Q8R1T1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Chmp7Q8R1T1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Chmp7Q8R1T1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Chmp7Q8R1T1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Chmp7Q8R1T1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Chmp7Q8R1T1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Chmp7Q8R1T1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Chmp7Q8R1T1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Chmp7Q8R1T1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
Chmp7Q8R1T1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Chmp7Q8R1T1 Mir2861-201ENSMUST00000175539 82 ntBASIC23.21■■□□□ 1.31
Chmp7Q8R1T1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Chmp7Q8R1T1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC23.21■■□□□ 1.31
Chmp7Q8R1T1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC23.21■■□□□ 1.31
Chmp7Q8R1T1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC23.21■■□□□ 1.31
Chmp7Q8R1T1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Chmp7Q8R1T1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Chmp7Q8R1T1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Chmp7Q8R1T1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Chmp7Q8R1T1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Chmp7Q8R1T1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Chmp7Q8R1T1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Chmp7Q8R1T1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Chmp7Q8R1T1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Chmp7Q8R1T1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Chmp7Q8R1T1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Chmp7Q8R1T1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chmp7Q8R1T1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC23.19■■□□□ 1.3
Chmp7Q8R1T1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Chmp7Q8R1T1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chmp7Q8R1T1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Chmp7Q8R1T1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC23.19■■□□□ 1.3
Chmp7Q8R1T1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC23.19■■□□□ 1.3
Chmp7Q8R1T1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC23.19■■□□□ 1.3
Chmp7Q8R1T1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Chmp7Q8R1T1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chmp7Q8R1T1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chmp7Q8R1T1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chmp7Q8R1T1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chmp7Q8R1T1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Chmp7Q8R1T1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Chmp7Q8R1T1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chmp7Q8R1T1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC23.18■■□□□ 1.3
Chmp7Q8R1T1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Chmp7Q8R1T1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Chmp7Q8R1T1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Chmp7Q8R1T1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Chmp7Q8R1T1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Chmp7Q8R1T1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Chmp7Q8R1T1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Chmp7Q8R1T1 Gm7889-201ENSMUST00000185591 958 ntBASIC23.18■■□□□ 1.3
Chmp7Q8R1T1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Chmp7Q8R1T1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Chmp7Q8R1T1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Chmp7Q8R1T1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chmp7Q8R1T1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chmp7Q8R1T1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chmp7Q8R1T1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chmp7Q8R1T1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms