Protein–RNA interactions for Protein: Q8R0W1

Cipc, CLOCK-interacting pacemaker, mousemouse

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CipcQ8R0W1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
CipcQ8R0W1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CipcQ8R0W1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CipcQ8R0W1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CipcQ8R0W1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CipcQ8R0W1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CipcQ8R0W1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CipcQ8R0W1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.13■□□□□ 0.33
CipcQ8R0W1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CipcQ8R0W1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CipcQ8R0W1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CipcQ8R0W1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.13■□□□□ 0.33
CipcQ8R0W1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.13■□□□□ 0.33
CipcQ8R0W1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CipcQ8R0W1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CipcQ8R0W1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CipcQ8R0W1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
CipcQ8R0W1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CipcQ8R0W1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CipcQ8R0W1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.12■□□□□ 0.33
CipcQ8R0W1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CipcQ8R0W1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CipcQ8R0W1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CipcQ8R0W1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CipcQ8R0W1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CipcQ8R0W1 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.12■□□□□ 0.33
CipcQ8R0W1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CipcQ8R0W1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CipcQ8R0W1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CipcQ8R0W1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.12■□□□□ 0.33
CipcQ8R0W1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CipcQ8R0W1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.12■□□□□ 0.33
CipcQ8R0W1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CipcQ8R0W1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CipcQ8R0W1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CipcQ8R0W1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CipcQ8R0W1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CipcQ8R0W1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CipcQ8R0W1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CipcQ8R0W1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CipcQ8R0W1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.11■□□□□ 0.33
CipcQ8R0W1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CipcQ8R0W1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CipcQ8R0W1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CipcQ8R0W1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CipcQ8R0W1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
CipcQ8R0W1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CipcQ8R0W1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CipcQ8R0W1 Gm12527-201ENSMUST00000117967 564 ntBASIC17.11■□□□□ 0.33
CipcQ8R0W1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.11■□□□□ 0.33
CipcQ8R0W1 Gm20049-201ENSMUST00000219950 730 ntBASIC17.11■□□□□ 0.33
CipcQ8R0W1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CipcQ8R0W1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CipcQ8R0W1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CipcQ8R0W1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CipcQ8R0W1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CipcQ8R0W1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CipcQ8R0W1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CipcQ8R0W1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CipcQ8R0W1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CipcQ8R0W1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CipcQ8R0W1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CipcQ8R0W1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CipcQ8R0W1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CipcQ8R0W1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CipcQ8R0W1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CipcQ8R0W1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.1■□□□□ 0.33
CipcQ8R0W1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CipcQ8R0W1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CipcQ8R0W1 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.1■□□□□ 0.33
CipcQ8R0W1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CipcQ8R0W1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CipcQ8R0W1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CipcQ8R0W1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CipcQ8R0W1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CipcQ8R0W1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CipcQ8R0W1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CipcQ8R0W1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CipcQ8R0W1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CipcQ8R0W1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CipcQ8R0W1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.09■□□□□ 0.33
CipcQ8R0W1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.09■□□□□ 0.33
CipcQ8R0W1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CipcQ8R0W1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CipcQ8R0W1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CipcQ8R0W1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CipcQ8R0W1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.09■□□□□ 0.33
CipcQ8R0W1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CipcQ8R0W1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CipcQ8R0W1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CipcQ8R0W1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CipcQ8R0W1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CipcQ8R0W1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CipcQ8R0W1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CipcQ8R0W1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.08■□□□□ 0.33
CipcQ8R0W1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CipcQ8R0W1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CipcQ8R0W1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CipcQ8R0W1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CipcQ8R0W1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms