Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC23.82■■□□□ 1.4
Ddx54Q8K4L0 Gm43514-201ENSMUST00000198852 424 ntBASIC23.82■■□□□ 1.4
Ddx54Q8K4L0 Gm17808-201ENSMUST00000200859 894 ntBASIC23.82■■□□□ 1.4
Ddx54Q8K4L0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ddx54Q8K4L0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ddx54Q8K4L0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ddx54Q8K4L0 Gm9013-201ENSMUST00000132939 882 ntBASIC23.81■■□□□ 1.4
Ddx54Q8K4L0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
Ddx54Q8K4L0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ddx54Q8K4L0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ddx54Q8K4L0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC23.81■■□□□ 1.4
Ddx54Q8K4L0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ddx54Q8K4L0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ddx54Q8K4L0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ddx54Q8K4L0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ddx54Q8K4L0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Ddx54Q8K4L0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Ddx54Q8K4L0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx54Q8K4L0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC23.8■■□□□ 1.4
Ddx54Q8K4L0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx54Q8K4L0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx54Q8K4L0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC23.8■■□□□ 1.4
Ddx54Q8K4L0 Mir2861-201ENSMUST00000175539 82 ntBASIC23.8■■□□□ 1.4
Ddx54Q8K4L0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC23.8■■□□□ 1.4
Ddx54Q8K4L0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC23.8■■□□□ 1.4
Ddx54Q8K4L0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Ddx54Q8K4L0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx54Q8K4L0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx54Q8K4L0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx54Q8K4L0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
Ddx54Q8K4L0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ddx54Q8K4L0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ddx54Q8K4L0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Ddx54Q8K4L0 Gm6443-201ENSMUST00000203599 874 ntBASIC23.79■■□□□ 1.4
Ddx54Q8K4L0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ddx54Q8K4L0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ddx54Q8K4L0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ddx54Q8K4L0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx54Q8K4L0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx54Q8K4L0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx54Q8K4L0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx54Q8K4L0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx54Q8K4L0 Gm18958-201ENSMUST00000174258 762 ntBASIC23.78■■□□□ 1.4
Ddx54Q8K4L0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx54Q8K4L0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx54Q8K4L0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx54Q8K4L0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx54Q8K4L0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx54Q8K4L0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC23.77■■□□□ 1.4
Ddx54Q8K4L0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Ddx54Q8K4L0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC23.77■■□□□ 1.4
Ddx54Q8K4L0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC23.77■■□□□ 1.4
Ddx54Q8K4L0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC23.77■■□□□ 1.4
Ddx54Q8K4L0 Gm13474-201ENSMUST00000122466 815 ntBASIC23.77■■□□□ 1.4
Ddx54Q8K4L0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx54Q8K4L0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC23.77■■□□□ 1.4
Ddx54Q8K4L0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
Ddx54Q8K4L0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
Ddx54Q8K4L0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx54Q8K4L0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx54Q8K4L0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Ddx54Q8K4L0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC23.76■■□□□ 1.39
Ddx54Q8K4L0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ddx54Q8K4L0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Ddx54Q8K4L0 Gm24589-201ENSMUST00000116692 94 ntBASIC23.76■■□□□ 1.39
Ddx54Q8K4L0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC23.76■■□□□ 1.39
Ddx54Q8K4L0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ddx54Q8K4L0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ddx54Q8K4L0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ddx54Q8K4L0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx54Q8K4L0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx54Q8K4L0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx54Q8K4L0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC23.75■■□□□ 1.39
Ddx54Q8K4L0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Ddx54Q8K4L0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx54Q8K4L0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Ddx54Q8K4L0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx54Q8K4L0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx54Q8K4L0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx54Q8K4L0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx54Q8K4L0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC23.74■■□□□ 1.39
Ddx54Q8K4L0 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.74■■□□□ 1.39
Ddx54Q8K4L0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx54Q8K4L0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx54Q8K4L0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx54Q8K4L0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
Ddx54Q8K4L0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx54Q8K4L0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx54Q8K4L0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx54Q8K4L0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx54Q8K4L0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Ddx54Q8K4L0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx54Q8K4L0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx54Q8K4L0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Ddx54Q8K4L0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx54Q8K4L0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx54Q8K4L0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
Ddx54Q8K4L0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx54Q8K4L0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx54Q8K4L0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms