Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alms1Q8K4E0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Alms1Q8K4E0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Alms1Q8K4E0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Alms1Q8K4E0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Alms1Q8K4E0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Alms1Q8K4E0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Alms1Q8K4E0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Alms1Q8K4E0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Alms1Q8K4E0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Alms1Q8K4E0 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.77■□□□□ 0.43
Alms1Q8K4E0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Alms1Q8K4E0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.76■□□□□ 0.43
Alms1Q8K4E0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Alms1Q8K4E0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Alms1Q8K4E0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Alms1Q8K4E0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alms1Q8K4E0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alms1Q8K4E0 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.76■□□□□ 0.43
Alms1Q8K4E0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alms1Q8K4E0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alms1Q8K4E0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Alms1Q8K4E0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alms1Q8K4E0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Alms1Q8K4E0 Gm23634-201ENSMUST00000175071 91 ntBASIC17.76■□□□□ 0.43
Alms1Q8K4E0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alms1Q8K4E0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alms1Q8K4E0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alms1Q8K4E0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Alms1Q8K4E0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Alms1Q8K4E0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alms1Q8K4E0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Alms1Q8K4E0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alms1Q8K4E0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Alms1Q8K4E0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Alms1Q8K4E0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Alms1Q8K4E0 Gm18025-201ENSMUST00000221733 862 ntBASIC17.75■□□□□ 0.43
Alms1Q8K4E0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alms1Q8K4E0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alms1Q8K4E0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alms1Q8K4E0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Alms1Q8K4E0 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.74■□□□□ 0.43
Alms1Q8K4E0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Alms1Q8K4E0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Alms1Q8K4E0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Alms1Q8K4E0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Alms1Q8K4E0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Alms1Q8K4E0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Alms1Q8K4E0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Alms1Q8K4E0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Alms1Q8K4E0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.74■□□□□ 0.43
Alms1Q8K4E0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Alms1Q8K4E0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Alms1Q8K4E0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Alms1Q8K4E0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Alms1Q8K4E0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Alms1Q8K4E0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Alms1Q8K4E0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Alms1Q8K4E0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
Alms1Q8K4E0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.73■□□□□ 0.43
Alms1Q8K4E0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Alms1Q8K4E0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Alms1Q8K4E0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Alms1Q8K4E0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Alms1Q8K4E0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.73■□□□□ 0.43
Alms1Q8K4E0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Alms1Q8K4E0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Alms1Q8K4E0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Alms1Q8K4E0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.73■□□□□ 0.43
Alms1Q8K4E0 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.73■□□□□ 0.43
Alms1Q8K4E0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Alms1Q8K4E0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Alms1Q8K4E0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Alms1Q8K4E0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Alms1Q8K4E0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.72■□□□□ 0.43
Alms1Q8K4E0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Alms1Q8K4E0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Alms1Q8K4E0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Alms1Q8K4E0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Alms1Q8K4E0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Alms1Q8K4E0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Alms1Q8K4E0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Alms1Q8K4E0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Alms1Q8K4E0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Alms1Q8K4E0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Alms1Q8K4E0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.71■□□□□ 0.43
Alms1Q8K4E0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Alms1Q8K4E0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Alms1Q8K4E0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Alms1Q8K4E0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Alms1Q8K4E0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Alms1Q8K4E0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Alms1Q8K4E0 Odf3b-204ENSMUST00000227834 930 ntBASIC17.71■□□□□ 0.42
Alms1Q8K4E0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Alms1Q8K4E0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Alms1Q8K4E0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alms1Q8K4E0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alms1Q8K4E0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Alms1Q8K4E0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alms1Q8K4E0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms