Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lin28aQ8K3Y3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.92■□□□□ 0.3
Lin28aQ8K3Y3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lin28aQ8K3Y3 Flg-201ENSMUST00000050758 1488 ntBASIC16.92■□□□□ 0.3
Lin28aQ8K3Y3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lin28aQ8K3Y3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Lin28aQ8K3Y3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lin28aQ8K3Y3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lin28aQ8K3Y3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lin28aQ8K3Y3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Lin28aQ8K3Y3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lin28aQ8K3Y3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.91■□□□□ 0.3
Lin28aQ8K3Y3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lin28aQ8K3Y3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lin28aQ8K3Y3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.91■□□□□ 0.3
Lin28aQ8K3Y3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.91■□□□□ 0.3
Lin28aQ8K3Y3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lin28aQ8K3Y3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Lin28aQ8K3Y3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Lin28aQ8K3Y3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lin28aQ8K3Y3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.91■□□□□ 0.3
Lin28aQ8K3Y3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lin28aQ8K3Y3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lin28aQ8K3Y3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.9■□□□□ 0.3
Lin28aQ8K3Y3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lin28aQ8K3Y3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lin28aQ8K3Y3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lin28aQ8K3Y3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lin28aQ8K3Y3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Lin28aQ8K3Y3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.9■□□□□ 0.3
Lin28aQ8K3Y3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lin28aQ8K3Y3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
Lin28aQ8K3Y3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lin28aQ8K3Y3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
Lin28aQ8K3Y3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.9■□□□□ 0.3
Lin28aQ8K3Y3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lin28aQ8K3Y3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lin28aQ8K3Y3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lin28aQ8K3Y3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Lin28aQ8K3Y3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lin28aQ8K3Y3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
Lin28aQ8K3Y3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Lin28aQ8K3Y3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lin28aQ8K3Y3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Lin28aQ8K3Y3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Lin28aQ8K3Y3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lin28aQ8K3Y3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lin28aQ8K3Y3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lin28aQ8K3Y3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lin28aQ8K3Y3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Lin28aQ8K3Y3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lin28aQ8K3Y3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Lin28aQ8K3Y3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Lin28aQ8K3Y3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.89■□□□□ 0.29
Lin28aQ8K3Y3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lin28aQ8K3Y3 Gm10812-201ENSMUST00000099864 546 ntBASIC16.89■□□□□ 0.29
Lin28aQ8K3Y3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lin28aQ8K3Y3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lin28aQ8K3Y3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lin28aQ8K3Y3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.88■□□□□ 0.29
Lin28aQ8K3Y3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lin28aQ8K3Y3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lin28aQ8K3Y3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lin28aQ8K3Y3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lin28aQ8K3Y3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lin28aQ8K3Y3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lin28aQ8K3Y3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lin28aQ8K3Y3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Lin28aQ8K3Y3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lin28aQ8K3Y3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lin28aQ8K3Y3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lin28aQ8K3Y3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lin28aQ8K3Y3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lin28aQ8K3Y3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lin28aQ8K3Y3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lin28aQ8K3Y3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.88■□□□□ 0.29
Lin28aQ8K3Y3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lin28aQ8K3Y3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lin28aQ8K3Y3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lin28aQ8K3Y3 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.87■□□□□ 0.29
Lin28aQ8K3Y3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lin28aQ8K3Y3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Lin28aQ8K3Y3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
Lin28aQ8K3Y3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.87■□□□□ 0.29
Lin28aQ8K3Y3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lin28aQ8K3Y3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.87■□□□□ 0.29
Lin28aQ8K3Y3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.87■□□□□ 0.29
Lin28aQ8K3Y3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lin28aQ8K3Y3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Lin28aQ8K3Y3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lin28aQ8K3Y3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Lin28aQ8K3Y3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lin28aQ8K3Y3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lin28aQ8K3Y3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lin28aQ8K3Y3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lin28aQ8K3Y3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lin28aQ8K3Y3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lin28aQ8K3Y3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Lin28aQ8K3Y3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.86■□□□□ 0.29
Lin28aQ8K3Y3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms