Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cchcr1Q8K2I2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Cchcr1Q8K2I2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Cchcr1Q8K2I2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
Cchcr1Q8K2I2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.44■■□□□ 1.02
Cchcr1Q8K2I2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.44■■□□□ 1.02
Cchcr1Q8K2I2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cchcr1Q8K2I2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cchcr1Q8K2I2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cchcr1Q8K2I2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cchcr1Q8K2I2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cchcr1Q8K2I2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Cchcr1Q8K2I2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cchcr1Q8K2I2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cchcr1Q8K2I2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cchcr1Q8K2I2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Cchcr1Q8K2I2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.43■■□□□ 1.02
Cchcr1Q8K2I2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cchcr1Q8K2I2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
Cchcr1Q8K2I2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Cchcr1Q8K2I2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cchcr1Q8K2I2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cchcr1Q8K2I2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cchcr1Q8K2I2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cchcr1Q8K2I2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cchcr1Q8K2I2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cchcr1Q8K2I2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cchcr1Q8K2I2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cchcr1Q8K2I2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cchcr1Q8K2I2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cchcr1Q8K2I2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cchcr1Q8K2I2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cchcr1Q8K2I2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cchcr1Q8K2I2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cchcr1Q8K2I2 Gm42642-201ENSMUST00000200683 355 ntBASIC21.42■■□□□ 1.02
Cchcr1Q8K2I2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cchcr1Q8K2I2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cchcr1Q8K2I2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Cchcr1Q8K2I2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
Cchcr1Q8K2I2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cchcr1Q8K2I2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cchcr1Q8K2I2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cchcr1Q8K2I2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cchcr1Q8K2I2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cchcr1Q8K2I2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cchcr1Q8K2I2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cchcr1Q8K2I2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Cchcr1Q8K2I2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cchcr1Q8K2I2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cchcr1Q8K2I2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cchcr1Q8K2I2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cchcr1Q8K2I2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cchcr1Q8K2I2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cchcr1Q8K2I2 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.41■■□□□ 1.02
Cchcr1Q8K2I2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cchcr1Q8K2I2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cchcr1Q8K2I2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cchcr1Q8K2I2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cchcr1Q8K2I2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cchcr1Q8K2I2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Cchcr1Q8K2I2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Cchcr1Q8K2I2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cchcr1Q8K2I2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cchcr1Q8K2I2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cchcr1Q8K2I2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.4■■□□□ 1.02
Cchcr1Q8K2I2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.4■■□□□ 1.02
Cchcr1Q8K2I2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cchcr1Q8K2I2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Cchcr1Q8K2I2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cchcr1Q8K2I2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cchcr1Q8K2I2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cchcr1Q8K2I2 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.4■■□□□ 1.02
Cchcr1Q8K2I2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Cchcr1Q8K2I2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cchcr1Q8K2I2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cchcr1Q8K2I2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
Cchcr1Q8K2I2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Cchcr1Q8K2I2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Cchcr1Q8K2I2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cchcr1Q8K2I2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Cchcr1Q8K2I2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cchcr1Q8K2I2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cchcr1Q8K2I2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Cchcr1Q8K2I2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cchcr1Q8K2I2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.39■■□□□ 1.01
Cchcr1Q8K2I2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.39■■□□□ 1.01
Cchcr1Q8K2I2 Gm5874-201ENSMUST00000096101 508 ntBASIC21.39■■□□□ 1.01
Cchcr1Q8K2I2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cchcr1Q8K2I2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cchcr1Q8K2I2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cchcr1Q8K2I2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.39■■□□□ 1.01
Cchcr1Q8K2I2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cchcr1Q8K2I2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cchcr1Q8K2I2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cchcr1Q8K2I2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC21.38■■□□□ 1.01
Cchcr1Q8K2I2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cchcr1Q8K2I2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.38■■□□□ 1.01
Cchcr1Q8K2I2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cchcr1Q8K2I2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cchcr1Q8K2I2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms