Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rtn1Q8K0T0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rtn1Q8K0T0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.92■□□□□ 0.94
Rtn1Q8K0T0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Rtn1Q8K0T0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rtn1Q8K0T0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rtn1Q8K0T0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rtn1Q8K0T0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtn1Q8K0T0 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.91■□□□□ 0.94
Rtn1Q8K0T0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtn1Q8K0T0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtn1Q8K0T0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Rtn1Q8K0T0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.91■□□□□ 0.94
Rtn1Q8K0T0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.91■□□□□ 0.94
Rtn1Q8K0T0 Fst-202ENSMUST00000223640 2612 ntBASIC20.91■□□□□ 0.94
Rtn1Q8K0T0 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.91■□□□□ 0.94
Rtn1Q8K0T0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtn1Q8K0T0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtn1Q8K0T0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rtn1Q8K0T0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtn1Q8K0T0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Rtn1Q8K0T0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtn1Q8K0T0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Rtn1Q8K0T0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rtn1Q8K0T0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Rtn1Q8K0T0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rtn1Q8K0T0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rtn1Q8K0T0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Rtn1Q8K0T0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.9■□□□□ 0.94
Rtn1Q8K0T0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.9■□□□□ 0.94
Rtn1Q8K0T0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.9■□□□□ 0.94
Rtn1Q8K0T0 Gm12441-201ENSMUST00000121806 588 ntBASIC20.9■□□□□ 0.94
Rtn1Q8K0T0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.9■□□□□ 0.94
Rtn1Q8K0T0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.9■□□□□ 0.94
Rtn1Q8K0T0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rtn1Q8K0T0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Rtn1Q8K0T0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rtn1Q8K0T0 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.9■□□□□ 0.94
Rtn1Q8K0T0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rtn1Q8K0T0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Rtn1Q8K0T0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rtn1Q8K0T0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rtn1Q8K0T0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rtn1Q8K0T0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rtn1Q8K0T0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rtn1Q8K0T0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Rtn1Q8K0T0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn1Q8K0T0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn1Q8K0T0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn1Q8K0T0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn1Q8K0T0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn1Q8K0T0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn1Q8K0T0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.88■□□□□ 0.93
Rtn1Q8K0T0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn1Q8K0T0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn1Q8K0T0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.88■□□□□ 0.93
Rtn1Q8K0T0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn1Q8K0T0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn1Q8K0T0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn1Q8K0T0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rtn1Q8K0T0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Rtn1Q8K0T0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtn1Q8K0T0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Rtn1Q8K0T0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.87■□□□□ 0.93
Rtn1Q8K0T0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.87■□□□□ 0.93
Rtn1Q8K0T0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtn1Q8K0T0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rtn1Q8K0T0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtn1Q8K0T0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtn1Q8K0T0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtn1Q8K0T0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtn1Q8K0T0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtn1Q8K0T0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtn1Q8K0T0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rtn1Q8K0T0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rtn1Q8K0T0 Gm2559-201ENSMUST00000201323 363 ntBASIC20.86■□□□□ 0.93
Rtn1Q8K0T0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtn1Q8K0T0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtn1Q8K0T0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtn1Q8K0T0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.86■□□□□ 0.93
Rtn1Q8K0T0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Rtn1Q8K0T0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtn1Q8K0T0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtn1Q8K0T0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.86■□□□□ 0.93
Rtn1Q8K0T0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtn1Q8K0T0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtn1Q8K0T0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtn1Q8K0T0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtn1Q8K0T0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtn1Q8K0T0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rtn1Q8K0T0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtn1Q8K0T0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtn1Q8K0T0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtn1Q8K0T0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtn1Q8K0T0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Rtn1Q8K0T0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtn1Q8K0T0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rtn1Q8K0T0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.84■□□□□ 0.93
Rtn1Q8K0T0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtn1Q8K0T0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms