Protein–RNA interactions for Protein: Q8K0H1

Slc47a1, Multidrug and toxin extrusion protein 1, mousemouse

Predictions only

Length 567 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc47a1Q8K0H1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc47a1Q8K0H1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Slc47a1Q8K0H1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.88■□□□□ 0.45
Slc47a1Q8K0H1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.88■□□□□ 0.45
Slc47a1Q8K0H1 Gm37179-201ENSMUST00000194862 823 ntBASIC17.88■□□□□ 0.45
Slc47a1Q8K0H1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc47a1Q8K0H1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc47a1Q8K0H1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.88■□□□□ 0.45
Slc47a1Q8K0H1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Slc47a1Q8K0H1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Slc47a1Q8K0H1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc47a1Q8K0H1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Slc47a1Q8K0H1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.87■□□□□ 0.45
Slc47a1Q8K0H1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.87■□□□□ 0.45
Slc47a1Q8K0H1 Gm10033-202ENSMUST00000211874 928 ntBASIC17.87■□□□□ 0.45
Slc47a1Q8K0H1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Slc47a1Q8K0H1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc47a1Q8K0H1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Slc47a1Q8K0H1 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.87■□□□□ 0.45
Slc47a1Q8K0H1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Slc47a1Q8K0H1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc47a1Q8K0H1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc47a1Q8K0H1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc47a1Q8K0H1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc47a1Q8K0H1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Slc47a1Q8K0H1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Slc47a1Q8K0H1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Slc47a1Q8K0H1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc47a1Q8K0H1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Slc47a1Q8K0H1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc47a1Q8K0H1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc47a1Q8K0H1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc47a1Q8K0H1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc47a1Q8K0H1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc47a1Q8K0H1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Slc47a1Q8K0H1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Slc47a1Q8K0H1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc47a1Q8K0H1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc47a1Q8K0H1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc47a1Q8K0H1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc47a1Q8K0H1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Slc47a1Q8K0H1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Slc47a1Q8K0H1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc47a1Q8K0H1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc47a1Q8K0H1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc47a1Q8K0H1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc47a1Q8K0H1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Slc47a1Q8K0H1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Slc47a1Q8K0H1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc47a1Q8K0H1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc47a1Q8K0H1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc47a1Q8K0H1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.84■□□□□ 0.45
Slc47a1Q8K0H1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.84■□□□□ 0.45
Slc47a1Q8K0H1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc47a1Q8K0H1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.84■□□□□ 0.45
Slc47a1Q8K0H1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc47a1Q8K0H1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slc47a1Q8K0H1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slc47a1Q8K0H1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.84■□□□□ 0.45
Slc47a1Q8K0H1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Slc47a1Q8K0H1 AV356131-201ENSMUST00000206201 750 ntBASIC17.84■□□□□ 0.45
Slc47a1Q8K0H1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slc47a1Q8K0H1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.84■□□□□ 0.45
Slc47a1Q8K0H1 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.84■□□□□ 0.45
Slc47a1Q8K0H1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc47a1Q8K0H1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc47a1Q8K0H1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc47a1Q8K0H1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc47a1Q8K0H1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc47a1Q8K0H1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc47a1Q8K0H1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc47a1Q8K0H1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc47a1Q8K0H1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc47a1Q8K0H1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.83■□□□□ 0.44
Slc47a1Q8K0H1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.83■□□□□ 0.44
Slc47a1Q8K0H1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.83■□□□□ 0.44
Slc47a1Q8K0H1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc47a1Q8K0H1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc47a1Q8K0H1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc47a1Q8K0H1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc47a1Q8K0H1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc47a1Q8K0H1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc47a1Q8K0H1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc47a1Q8K0H1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc47a1Q8K0H1 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.82■□□□□ 0.44
Slc47a1Q8K0H1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Slc47a1Q8K0H1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc47a1Q8K0H1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc47a1Q8K0H1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc47a1Q8K0H1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc47a1Q8K0H1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc47a1Q8K0H1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc47a1Q8K0H1 Gm13534-201ENSMUST00000121169 513 ntBASIC17.82■□□□□ 0.44
Slc47a1Q8K0H1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc47a1Q8K0H1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Slc47a1Q8K0H1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.82■□□□□ 0.44
Slc47a1Q8K0H1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc47a1Q8K0H1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc47a1Q8K0H1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc47a1Q8K0H1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms