Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgcs1Q8JZK9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgcs1Q8JZK9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgcs1Q8JZK9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgcs1Q8JZK9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgcs1Q8JZK9 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.31■□□□□ 0.36
Hmgcs1Q8JZK9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Hmgcs1Q8JZK9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgcs1Q8JZK9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgcs1Q8JZK9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgcs1Q8JZK9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Hmgcs1Q8JZK9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgcs1Q8JZK9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgcs1Q8JZK9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgcs1Q8JZK9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hmgcs1Q8JZK9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgcs1Q8JZK9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgcs1Q8JZK9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgcs1Q8JZK9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgcs1Q8JZK9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcs1Q8JZK9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcs1Q8JZK9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Hmgcs1Q8JZK9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcs1Q8JZK9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcs1Q8JZK9 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.3■□□□□ 0.36
Hmgcs1Q8JZK9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.3■□□□□ 0.36
Hmgcs1Q8JZK9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Hmgcs1Q8JZK9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
Hmgcs1Q8JZK9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Hmgcs1Q8JZK9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.3■□□□□ 0.36
Hmgcs1Q8JZK9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.3■□□□□ 0.36
Hmgcs1Q8JZK9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.3■□□□□ 0.36
Hmgcs1Q8JZK9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcs1Q8JZK9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcs1Q8JZK9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcs1Q8JZK9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcs1Q8JZK9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.3■□□□□ 0.36
Hmgcs1Q8JZK9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcs1Q8JZK9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcs1Q8JZK9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.3■□□□□ 0.36
Hmgcs1Q8JZK9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Hmgcs1Q8JZK9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Hmgcs1Q8JZK9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgcs1Q8JZK9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.29■□□□□ 0.36
Hmgcs1Q8JZK9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgcs1Q8JZK9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Hmgcs1Q8JZK9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.29■□□□□ 0.36
Hmgcs1Q8JZK9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Hmgcs1Q8JZK9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgcs1Q8JZK9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgcs1Q8JZK9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgcs1Q8JZK9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.29■□□□□ 0.36
Hmgcs1Q8JZK9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Hmgcs1Q8JZK9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgcs1Q8JZK9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.28■□□□□ 0.36
Hmgcs1Q8JZK9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgcs1Q8JZK9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
Hmgcs1Q8JZK9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgcs1Q8JZK9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgcs1Q8JZK9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgcs1Q8JZK9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Hmgcs1Q8JZK9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgcs1Q8JZK9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgcs1Q8JZK9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgcs1Q8JZK9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgcs1Q8JZK9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Hmgcs1Q8JZK9 Gm15039-201ENSMUST00000118914 875 ntBASIC17.27■□□□□ 0.36
Hmgcs1Q8JZK9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgcs1Q8JZK9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.27■□□□□ 0.36
Hmgcs1Q8JZK9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgcs1Q8JZK9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.27■□□□□ 0.35
Hmgcs1Q8JZK9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Hmgcs1Q8JZK9 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.27■□□□□ 0.35
Hmgcs1Q8JZK9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmgcs1Q8JZK9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Hmgcs1Q8JZK9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgcs1Q8JZK9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgcs1Q8JZK9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Hmgcs1Q8JZK9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Hmgcs1Q8JZK9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgcs1Q8JZK9 Gm10033-202ENSMUST00000211874 928 ntBASIC17.26■□□□□ 0.35
Hmgcs1Q8JZK9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgcs1Q8JZK9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgcs1Q8JZK9 Tgds-204ENSMUST00000228543 1594 ntBASIC17.26■□□□□ 0.35
Hmgcs1Q8JZK9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgcs1Q8JZK9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Hmgcs1Q8JZK9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.26■□□□□ 0.35
Hmgcs1Q8JZK9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgcs1Q8JZK9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgcs1Q8JZK9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
Hmgcs1Q8JZK9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgcs1Q8JZK9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgcs1Q8JZK9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgcs1Q8JZK9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgcs1Q8JZK9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgcs1Q8JZK9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgcs1Q8JZK9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgcs1Q8JZK9 Gm5874-201ENSMUST00000096101 508 ntBASIC17.25■□□□□ 0.35
Hmgcs1Q8JZK9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgcs1Q8JZK9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms