Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vps50Q8CI71 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps50Q8CI71 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps50Q8CI71 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps50Q8CI71 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Vps50Q8CI71 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Vps50Q8CI71 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.78■□□□□ 0.44
Vps50Q8CI71 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps50Q8CI71 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vps50Q8CI71 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Vps50Q8CI71 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vps50Q8CI71 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps50Q8CI71 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.78■□□□□ 0.44
Vps50Q8CI71 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.78■□□□□ 0.44
Vps50Q8CI71 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps50Q8CI71 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vps50Q8CI71 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps50Q8CI71 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps50Q8CI71 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps50Q8CI71 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Vps50Q8CI71 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Vps50Q8CI71 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Vps50Q8CI71 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps50Q8CI71 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps50Q8CI71 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Vps50Q8CI71 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Vps50Q8CI71 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.77■□□□□ 0.44
Vps50Q8CI71 Gm13146-201ENSMUST00000118508 780 ntBASIC17.77■□□□□ 0.44
Vps50Q8CI71 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.77■□□□□ 0.44
Vps50Q8CI71 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Vps50Q8CI71 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps50Q8CI71 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Vps50Q8CI71 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Vps50Q8CI71 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.77■□□□□ 0.43
Vps50Q8CI71 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vps50Q8CI71 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vps50Q8CI71 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Vps50Q8CI71 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vps50Q8CI71 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vps50Q8CI71 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vps50Q8CI71 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Vps50Q8CI71 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps50Q8CI71 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps50Q8CI71 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.76■□□□□ 0.43
Vps50Q8CI71 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Vps50Q8CI71 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Vps50Q8CI71 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps50Q8CI71 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps50Q8CI71 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Vps50Q8CI71 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps50Q8CI71 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps50Q8CI71 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps50Q8CI71 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.75■□□□□ 0.43
Vps50Q8CI71 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps50Q8CI71 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps50Q8CI71 Mir5133-201ENSMUST00000174955 77 ntBASIC17.75■□□□□ 0.43
Vps50Q8CI71 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.75■□□□□ 0.43
Vps50Q8CI71 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.75■□□□□ 0.43
Vps50Q8CI71 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps50Q8CI71 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.75■□□□□ 0.43
Vps50Q8CI71 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps50Q8CI71 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps50Q8CI71 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps50Q8CI71 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps50Q8CI71 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps50Q8CI71 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps50Q8CI71 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps50Q8CI71 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps50Q8CI71 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps50Q8CI71 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps50Q8CI71 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps50Q8CI71 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps50Q8CI71 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Vps50Q8CI71 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps50Q8CI71 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps50Q8CI71 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.74■□□□□ 0.43
Vps50Q8CI71 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps50Q8CI71 Gm7290-201ENSMUST00000104990 617 ntBASIC17.74■□□□□ 0.43
Vps50Q8CI71 Gm12918-201ENSMUST00000120234 636 ntBASIC17.74■□□□□ 0.43
Vps50Q8CI71 Gm15710-201ENSMUST00000121821 636 ntBASIC17.74■□□□□ 0.43
Vps50Q8CI71 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vps50Q8CI71 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.74■□□□□ 0.43
Vps50Q8CI71 Gm5075-201ENSMUST00000196916 622 ntBASIC17.74■□□□□ 0.43
Vps50Q8CI71 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vps50Q8CI71 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.74■□□□□ 0.43
Vps50Q8CI71 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps50Q8CI71 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps50Q8CI71 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.74■□□□□ 0.43
Vps50Q8CI71 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.74■□□□□ 0.43
Vps50Q8CI71 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps50Q8CI71 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps50Q8CI71 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Vps50Q8CI71 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps50Q8CI71 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.74■□□□□ 0.43
Vps50Q8CI71 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vps50Q8CI71 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.73■□□□□ 0.43
Vps50Q8CI71 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps50Q8CI71 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps50Q8CI71 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps50Q8CI71 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms