Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Calcoco1Q8CGU1 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.88■□□□□ 0.61
Calcoco1Q8CGU1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Calcoco1Q8CGU1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
Calcoco1Q8CGU1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Calcoco1Q8CGU1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Calcoco1Q8CGU1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Calcoco1Q8CGU1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Calcoco1Q8CGU1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Calcoco1Q8CGU1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Calcoco1Q8CGU1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.87■□□□□ 0.61
Calcoco1Q8CGU1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Calcoco1Q8CGU1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Calcoco1Q8CGU1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Calcoco1Q8CGU1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Calcoco1Q8CGU1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Calcoco1Q8CGU1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Calcoco1Q8CGU1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.86■□□□□ 0.61
Calcoco1Q8CGU1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Calcoco1Q8CGU1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Calcoco1Q8CGU1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Calcoco1Q8CGU1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Calcoco1Q8CGU1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Calcoco1Q8CGU1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
Calcoco1Q8CGU1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Calcoco1Q8CGU1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Calcoco1Q8CGU1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Calcoco1Q8CGU1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Calcoco1Q8CGU1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Calcoco1Q8CGU1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Calcoco1Q8CGU1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Calcoco1Q8CGU1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Calcoco1Q8CGU1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Calcoco1Q8CGU1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Calcoco1Q8CGU1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Calcoco1Q8CGU1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Calcoco1Q8CGU1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Calcoco1Q8CGU1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Calcoco1Q8CGU1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Calcoco1Q8CGU1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Calcoco1Q8CGU1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.85■□□□□ 0.61
Calcoco1Q8CGU1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.85■□□□□ 0.61
Calcoco1Q8CGU1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Calcoco1Q8CGU1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Calcoco1Q8CGU1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Calcoco1Q8CGU1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Calcoco1Q8CGU1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Calcoco1Q8CGU1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Calcoco1Q8CGU1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.84■□□□□ 0.61
Calcoco1Q8CGU1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Calcoco1Q8CGU1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Calcoco1Q8CGU1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Calcoco1Q8CGU1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Calcoco1Q8CGU1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.84■□□□□ 0.61
Calcoco1Q8CGU1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Calcoco1Q8CGU1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Calcoco1Q8CGU1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Calcoco1Q8CGU1 Gm10493-201ENSMUST00000097270 612 ntBASIC18.84■□□□□ 0.61
Calcoco1Q8CGU1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Calcoco1Q8CGU1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Calcoco1Q8CGU1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.84■□□□□ 0.61
Calcoco1Q8CGU1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Calcoco1Q8CGU1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Calcoco1Q8CGU1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Calcoco1Q8CGU1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Calcoco1Q8CGU1 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.83■□□□□ 0.61
Calcoco1Q8CGU1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Calcoco1Q8CGU1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Calcoco1Q8CGU1 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.83■□□□□ 0.6
Calcoco1Q8CGU1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Calcoco1Q8CGU1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Calcoco1Q8CGU1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Calcoco1Q8CGU1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Calcoco1Q8CGU1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Calcoco1Q8CGU1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Calcoco1Q8CGU1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Calcoco1Q8CGU1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Calcoco1Q8CGU1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Calcoco1Q8CGU1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.82■□□□□ 0.6
Calcoco1Q8CGU1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Calcoco1Q8CGU1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Calcoco1Q8CGU1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.82■□□□□ 0.6
Calcoco1Q8CGU1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Calcoco1Q8CGU1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Calcoco1Q8CGU1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
Calcoco1Q8CGU1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Calcoco1Q8CGU1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Calcoco1Q8CGU1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Calcoco1Q8CGU1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.82■□□□□ 0.6
Calcoco1Q8CGU1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Calcoco1Q8CGU1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Calcoco1Q8CGU1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Calcoco1Q8CGU1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Calcoco1Q8CGU1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Calcoco1Q8CGU1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.81■□□□□ 0.6
Calcoco1Q8CGU1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.81■□□□□ 0.6
Calcoco1Q8CGU1 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.81■□□□□ 0.6
Calcoco1Q8CGU1 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.81■□□□□ 0.6
Calcoco1Q8CGU1 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.81■□□□□ 0.6
Calcoco1Q8CGU1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms