Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rab43Q8CG50 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab43Q8CG50 Gm21814-202ENSMUST00000203277 873 ntBASIC17.67■□□□□ 0.42
Rab43Q8CG50 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.67■□□□□ 0.42
Rab43Q8CG50 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.67■□□□□ 0.42
Rab43Q8CG50 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab43Q8CG50 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rab43Q8CG50 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab43Q8CG50 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rab43Q8CG50 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab43Q8CG50 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab43Q8CG50 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Gm37292-201ENSMUST00000192062 758 ntBASIC17.66■□□□□ 0.42
Rab43Q8CG50 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Gm30025-201ENSMUST00000218555 728 ntBASIC17.66■□□□□ 0.42
Rab43Q8CG50 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.66■□□□□ 0.42
Rab43Q8CG50 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab43Q8CG50 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rab43Q8CG50 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.65■□□□□ 0.42
Rab43Q8CG50 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.65■□□□□ 0.42
Rab43Q8CG50 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rab43Q8CG50 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rab43Q8CG50 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.65■□□□□ 0.42
Rab43Q8CG50 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab43Q8CG50 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab43Q8CG50 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rab43Q8CG50 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rab43Q8CG50 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab43Q8CG50 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab43Q8CG50 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rab43Q8CG50 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Rab43Q8CG50 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab43Q8CG50 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rab43Q8CG50 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.65■□□□□ 0.42
Rab43Q8CG50 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.65■□□□□ 0.42
Rab43Q8CG50 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab43Q8CG50 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab43Q8CG50 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.64■□□□□ 0.41
Rab43Q8CG50 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab43Q8CG50 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab43Q8CG50 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab43Q8CG50 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab43Q8CG50 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rab43Q8CG50 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.64■□□□□ 0.41
Rab43Q8CG50 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.64■□□□□ 0.41
Rab43Q8CG50 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rab43Q8CG50 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab43Q8CG50 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
Rab43Q8CG50 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rab43Q8CG50 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab43Q8CG50 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab43Q8CG50 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rab43Q8CG50 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab43Q8CG50 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab43Q8CG50 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rab43Q8CG50 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab43Q8CG50 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab43Q8CG50 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rab43Q8CG50 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rab43Q8CG50 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.63■□□□□ 0.41
Rab43Q8CG50 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab43Q8CG50 Timm23-208ENSMUST00000226683 750 ntBASIC17.63■□□□□ 0.41
Rab43Q8CG50 Odf3b-204ENSMUST00000227834 930 ntBASIC17.63■□□□□ 0.41
Rab43Q8CG50 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rab43Q8CG50 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rab43Q8CG50 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rab43Q8CG50 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab43Q8CG50 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab43Q8CG50 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab43Q8CG50 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rab43Q8CG50 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.62■□□□□ 0.41
Rab43Q8CG50 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.62■□□□□ 0.41
Rab43Q8CG50 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rab43Q8CG50 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab43Q8CG50 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab43Q8CG50 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab43Q8CG50 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rab43Q8CG50 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms