Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.92■□□□□ 0.46
Ccdc28bQ8CEG5 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc28bQ8CEG5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc28bQ8CEG5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc28bQ8CEG5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc28bQ8CEG5 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.91■□□□□ 0.46
Ccdc28bQ8CEG5 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc28bQ8CEG5 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Ccdc28bQ8CEG5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc28bQ8CEG5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
Ccdc28bQ8CEG5 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc28bQ8CEG5 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.91■□□□□ 0.46
Ccdc28bQ8CEG5 Gm27801-201ENSMUST00000184174 223 ntBASIC17.91■□□□□ 0.46
Ccdc28bQ8CEG5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc28bQ8CEG5 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc28bQ8CEG5 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc28bQ8CEG5 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc28bQ8CEG5 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc28bQ8CEG5 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.91■□□□□ 0.46
Ccdc28bQ8CEG5 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc28bQ8CEG5 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc28bQ8CEG5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc28bQ8CEG5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 Gm11421-201ENSMUST00000122124 294 ntBASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc28bQ8CEG5 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc28bQ8CEG5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc28bQ8CEG5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.89■□□□□ 0.45
Ccdc28bQ8CEG5 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc28bQ8CEG5 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc28bQ8CEG5 Smad6-203ENSMUST00000179458 273 ntBASIC17.89■□□□□ 0.45
Ccdc28bQ8CEG5 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.89■□□□□ 0.45
Ccdc28bQ8CEG5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.89■□□□□ 0.45
Ccdc28bQ8CEG5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc28bQ8CEG5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc28bQ8CEG5 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc28bQ8CEG5 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc28bQ8CEG5 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc28bQ8CEG5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28bQ8CEG5 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28bQ8CEG5 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28bQ8CEG5 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28bQ8CEG5 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ccdc28bQ8CEG5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28bQ8CEG5 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28bQ8CEG5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28bQ8CEG5 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28bQ8CEG5 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Ccdc28bQ8CEG5 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28bQ8CEG5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc28bQ8CEG5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28bQ8CEG5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28bQ8CEG5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28bQ8CEG5 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28bQ8CEG5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28bQ8CEG5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc28bQ8CEG5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc28bQ8CEG5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc28bQ8CEG5 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc28bQ8CEG5 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.87■□□□□ 0.45
Ccdc28bQ8CEG5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc28bQ8CEG5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc28bQ8CEG5 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc28bQ8CEG5 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc28bQ8CEG5 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc28bQ8CEG5 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc28bQ8CEG5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc28bQ8CEG5 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc28bQ8CEG5 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc28bQ8CEG5 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc28bQ8CEG5 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc28bQ8CEG5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Ccdc28bQ8CEG5 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc28bQ8CEG5 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.86■□□□□ 0.45
Ccdc28bQ8CEG5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc28bQ8CEG5 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.86■□□□□ 0.45
Ccdc28bQ8CEG5 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc28bQ8CEG5 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc28bQ8CEG5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms