Protein–RNA interactions for Protein: Q8CE50

Snx30, Sorting nexin-30, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx30Q8CE50 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.7■□□□□ 0.58
Snx30Q8CE50 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.7■□□□□ 0.58
Snx30Q8CE50 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx30Q8CE50 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Snx30Q8CE50 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx30Q8CE50 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx30Q8CE50 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Snx30Q8CE50 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
Snx30Q8CE50 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snx30Q8CE50 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Snx30Q8CE50 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx30Q8CE50 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx30Q8CE50 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx30Q8CE50 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx30Q8CE50 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Snx30Q8CE50 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx30Q8CE50 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.69■□□□□ 0.58
Snx30Q8CE50 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx30Q8CE50 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx30Q8CE50 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Snx30Q8CE50 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.69■□□□□ 0.58
Snx30Q8CE50 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx30Q8CE50 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Snx30Q8CE50 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx30Q8CE50 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx30Q8CE50 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.69■□□□□ 0.58
Snx30Q8CE50 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.69■□□□□ 0.58
Snx30Q8CE50 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx30Q8CE50 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx30Q8CE50 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Snx30Q8CE50 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Snx30Q8CE50 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx30Q8CE50 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx30Q8CE50 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx30Q8CE50 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Snx30Q8CE50 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx30Q8CE50 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Snx30Q8CE50 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Snx30Q8CE50 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.68■□□□□ 0.58
Snx30Q8CE50 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx30Q8CE50 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx30Q8CE50 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx30Q8CE50 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx30Q8CE50 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Snx30Q8CE50 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
Snx30Q8CE50 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Snx30Q8CE50 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Snx30Q8CE50 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Snx30Q8CE50 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Snx30Q8CE50 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Snx30Q8CE50 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.67■□□□□ 0.58
Snx30Q8CE50 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx30Q8CE50 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.67■□□□□ 0.58
Snx30Q8CE50 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.67■□□□□ 0.58
Snx30Q8CE50 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx30Q8CE50 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx30Q8CE50 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Snx30Q8CE50 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx30Q8CE50 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx30Q8CE50 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.66■□□□□ 0.58
Snx30Q8CE50 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Snx30Q8CE50 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Snx30Q8CE50 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.66■□□□□ 0.58
Snx30Q8CE50 Gm12933-201ENSMUST00000120203 872 ntBASIC18.66■□□□□ 0.58
Snx30Q8CE50 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Snx30Q8CE50 Gm6211-202ENSMUST00000167849 925 ntBASIC18.66■□□□□ 0.58
Snx30Q8CE50 Mir5133-201ENSMUST00000174955 77 ntBASIC18.66■□□□□ 0.58
Snx30Q8CE50 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx30Q8CE50 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.66■□□□□ 0.58
Snx30Q8CE50 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Snx30Q8CE50 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx30Q8CE50 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Snx30Q8CE50 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx30Q8CE50 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Snx30Q8CE50 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Snx30Q8CE50 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx30Q8CE50 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx30Q8CE50 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Snx30Q8CE50 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx30Q8CE50 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Snx30Q8CE50 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.65■□□□□ 0.58
Snx30Q8CE50 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Snx30Q8CE50 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx30Q8CE50 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Snx30Q8CE50 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx30Q8CE50 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx30Q8CE50 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx30Q8CE50 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Snx30Q8CE50 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Snx30Q8CE50 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.64■□□□□ 0.58
Snx30Q8CE50 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Snx30Q8CE50 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx30Q8CE50 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Snx30Q8CE50 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx30Q8CE50 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx30Q8CE50 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Snx30Q8CE50 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.64■□□□□ 0.57
Snx30Q8CE50 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.64■□□□□ 0.57
Snx30Q8CE50 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx30Q8CE50 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms