Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Alx1Q8C8B0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.22■□□□□ 0.99
Alx1Q8C8B0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Alx1Q8C8B0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Alx1Q8C8B0 Mir6349-201ENSMUST00000184059 97 ntBASIC21.22■□□□□ 0.99
Alx1Q8C8B0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Alx1Q8C8B0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Alx1Q8C8B0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Alx1Q8C8B0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Alx1Q8C8B0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Alx1Q8C8B0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Alx1Q8C8B0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Alx1Q8C8B0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Alx1Q8C8B0 Fst-202ENSMUST00000223640 2612 ntBASIC21.21■□□□□ 0.99
Alx1Q8C8B0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Alx1Q8C8B0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Alx1Q8C8B0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.21■□□□□ 0.99
Alx1Q8C8B0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Alx1Q8C8B0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.21■□□□□ 0.99
Alx1Q8C8B0 Gm15375-201ENSMUST00000119510 849 ntBASIC21.21■□□□□ 0.99
Alx1Q8C8B0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Alx1Q8C8B0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.21■□□□□ 0.99
Alx1Q8C8B0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Alx1Q8C8B0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Alx1Q8C8B0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Alx1Q8C8B0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Alx1Q8C8B0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.2■□□□□ 0.98
Alx1Q8C8B0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Alx1Q8C8B0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Alx1Q8C8B0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Alx1Q8C8B0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Alx1Q8C8B0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.2■□□□□ 0.98
Alx1Q8C8B0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.2■□□□□ 0.98
Alx1Q8C8B0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.2■□□□□ 0.98
Alx1Q8C8B0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Alx1Q8C8B0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Alx1Q8C8B0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Alx1Q8C8B0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Alx1Q8C8B0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Alx1Q8C8B0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Alx1Q8C8B0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Alx1Q8C8B0 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.2■□□□□ 0.98
Alx1Q8C8B0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Alx1Q8C8B0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.19■□□□□ 0.98
Alx1Q8C8B0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Alx1Q8C8B0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Alx1Q8C8B0 Gm22240-201ENSMUST00000175225 82 ntBASIC21.19■□□□□ 0.98
Alx1Q8C8B0 Gm10698-201ENSMUST00000182663 604 ntBASIC21.19■□□□□ 0.98
Alx1Q8C8B0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Alx1Q8C8B0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Alx1Q8C8B0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.19■□□□□ 0.98
Alx1Q8C8B0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.19■□□□□ 0.98
Alx1Q8C8B0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.19■□□□□ 0.98
Alx1Q8C8B0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Alx1Q8C8B0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Alx1Q8C8B0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Alx1Q8C8B0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Alx1Q8C8B0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Alx1Q8C8B0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Alx1Q8C8B0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Alx1Q8C8B0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Alx1Q8C8B0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Alx1Q8C8B0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.18■□□□□ 0.98
Alx1Q8C8B0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Alx1Q8C8B0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Alx1Q8C8B0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Alx1Q8C8B0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.18■□□□□ 0.98
Alx1Q8C8B0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.18■□□□□ 0.98
Alx1Q8C8B0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Alx1Q8C8B0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Alx1Q8C8B0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.18■□□□□ 0.98
Alx1Q8C8B0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Alx1Q8C8B0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Alx1Q8C8B0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Alx1Q8C8B0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Alx1Q8C8B0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Alx1Q8C8B0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.17■□□□□ 0.98
Alx1Q8C8B0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Alx1Q8C8B0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.17■□□□□ 0.98
Alx1Q8C8B0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Alx1Q8C8B0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Alx1Q8C8B0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Alx1Q8C8B0 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.17■□□□□ 0.98
Alx1Q8C8B0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Alx1Q8C8B0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Alx1Q8C8B0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Alx1Q8C8B0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Alx1Q8C8B0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Alx1Q8C8B0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Alx1Q8C8B0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Alx1Q8C8B0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Alx1Q8C8B0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Alx1Q8C8B0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Alx1Q8C8B0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Alx1Q8C8B0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Alx1Q8C8B0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Alx1Q8C8B0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Alx1Q8C8B0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Alx1Q8C8B0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.16■□□□□ 0.98
Alx1Q8C8B0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms