Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trerf1Q8BXJ2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trerf1Q8BXJ2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.03■□□□□ 0.64
Trerf1Q8BXJ2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trerf1Q8BXJ2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trerf1Q8BXJ2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trerf1Q8BXJ2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trerf1Q8BXJ2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trerf1Q8BXJ2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Trerf1Q8BXJ2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trerf1Q8BXJ2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trerf1Q8BXJ2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trerf1Q8BXJ2 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.02■□□□□ 0.64
Trerf1Q8BXJ2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trerf1Q8BXJ2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trerf1Q8BXJ2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trerf1Q8BXJ2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trerf1Q8BXJ2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trerf1Q8BXJ2 Gm5784-201ENSMUST00000179344 2478 ntBASIC19■□□□□ 0.63
Trerf1Q8BXJ2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trerf1Q8BXJ2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trerf1Q8BXJ2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trerf1Q8BXJ2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trerf1Q8BXJ2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Trerf1Q8BXJ2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trerf1Q8BXJ2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trerf1Q8BXJ2 Gm10602-201ENSMUST00000098239 609 ntBASIC19■□□□□ 0.63
Trerf1Q8BXJ2 Gm10167-201ENSMUST00000150411 1479 ntBASIC19■□□□□ 0.63
Trerf1Q8BXJ2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trerf1Q8BXJ2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trerf1Q8BXJ2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trerf1Q8BXJ2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trerf1Q8BXJ2 Gm35558-201ENSMUST00000222675 2219 ntBASIC19■□□□□ 0.63
Trerf1Q8BXJ2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trerf1Q8BXJ2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trerf1Q8BXJ2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trerf1Q8BXJ2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trerf1Q8BXJ2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trerf1Q8BXJ2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Trerf1Q8BXJ2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trerf1Q8BXJ2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trerf1Q8BXJ2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trerf1Q8BXJ2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trerf1Q8BXJ2 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.99■□□□□ 0.63
Trerf1Q8BXJ2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trerf1Q8BXJ2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trerf1Q8BXJ2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trerf1Q8BXJ2 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.99■□□□□ 0.63
Trerf1Q8BXJ2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trerf1Q8BXJ2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trerf1Q8BXJ2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trerf1Q8BXJ2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trerf1Q8BXJ2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trerf1Q8BXJ2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trerf1Q8BXJ2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trerf1Q8BXJ2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trerf1Q8BXJ2 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.98■□□□□ 0.63
Trerf1Q8BXJ2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trerf1Q8BXJ2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trerf1Q8BXJ2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trerf1Q8BXJ2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trerf1Q8BXJ2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trerf1Q8BXJ2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trerf1Q8BXJ2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trerf1Q8BXJ2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.98■□□□□ 0.63
Trerf1Q8BXJ2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trerf1Q8BXJ2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trerf1Q8BXJ2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trerf1Q8BXJ2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trerf1Q8BXJ2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms